A total crapshoot? Evaluating bioinformatic decisions in animal diet metabarcoding analyses

DR O'Rourke, NA Bokulich, MA Jusino… - Ecology and …, 2020 - Wiley Online Library
Metabarcoding studies provide a powerful approach to estimate the diversity and
abundance of organisms in mixed communities in nature. While strategies exist for …

Subsurface microbial communities as a tool for characterizing regional-scale groundwater flow

N Merino, TR Jackson, JH Campbell… - Science of the Total …, 2022 - Elsevier
Subsurface microbial community distribution patterns are influenced by biogeochemical and
groundwater fluxes and may inform hydraulic connections along groundwater-flow paths …

Lactoferrin modulates gut microbiota and Toll-like receptors (TLRs) in mice with dysbiosis induced by antibiotics

A Bellés, D Aguirre-Ramírez, I Abad, M Parras-Moltó… - Food & Function, 2022 - pubs.rsc.org
Background: Antibiotic administration can result in gut microbiota and immune system
alterations that impact health. Bovine lactoferrin is a milk protein with anticancer, anti …

The microbiome of the pregnant uterus in Holstein dairy heifers and cows assessed by bacterial culture and 16S ribosomal RNA gene sequencing

JGN Moraes, T Gull, AC Ericsson, SE Poock… - Frontiers in …, 2024 - frontiersin.org
Introduction The possibility that there is a resident and stable commensal microbiome within
the pregnant uterus has been supported and refuted by a series of recent studies. One …

[HTML][HTML] A pilot-scale study of granule-based anaerobic reactors for biogas recovery from municipal wastewater under sub-mesophilic conditions

I Owusu-Agyeman, E Plaza, Z Cetecioglu - Bioresource Technology, 2021 - Elsevier
The influence of hydraulic retention time (HRT of 3-5 h) and temperature (20-25° C) on
performance and microbial dynamics of two pilot-scale upflow anaerobic sludge blanket …

[HTML][HTML] Plant genotype and seasonality drive fine changes in olive root microbiota

M Chialva, S De Rose, M Novero, L Lanfranco… - Current Plant …, 2021 - Elsevier
Due to global warming, the cultivation range of many crops is extending at higher altitudes
and latitudes exposing plants to new climatic and environmental conditions, as early spring …

Meta-analysis cum machine learning approaches address the structure and biogeochemical potential of marine copepod associated bacteriobiomes

B Sadaiappan, C PrasannaKumar, VU Nambiar… - Scientific Reports, 2021 - nature.com
Copepods are the dominant members of the zooplankton community and the most abundant
form of life. It is imperative to obtain insights into the copepod-associated bacteriobiomes …

The efficacy of short-term weight loss programs and consumption of natural probiotic bryndza cheese on gut microbiota composition in women

I Hric, S Ugrayová, A Penesová, Ž Rádiková… - Nutrients, 2021 - mdpi.com
Weight loss interventions with probiotics have favourable effects on gut microbiota
composition and derived metabolites. However, little is known about whether the …

Distribution patterns of benthic bacteria and nematode communities in estuarine sediments

S Vieira, K Sroczyńska, J Neves, M Martins… - Estuarine, Coastal and …, 2023 - Elsevier
Benthic organisms are crucial in the regulation of the ecosystem functions. The interactions
between benthic nematodes and sediment bacteria across divergent environmental …

Contrasting Nitrogen Fertilization and Brassica napus (Canola) Variety Development Impact Recruitment of the Root-Associated Microbiome

Y Li, SL Vail, MM Arcand… - Phytobiomes Journal, 2023 - Am Phytopath Society
Canola (Brassica napus) is an important broadacre crop, produced under high nitrogen (N)
fertilizer application. Modern canola varieties are developed under high N rates but the …