Improving salinity tolerance in cereals

M Shahbaz, M Ashraf - Critical reviews in plant sciences, 2013 - Taylor & Francis
Cereals are grown in almost every region of the world and are exposed to a variety of
environmental stresses that severely affect their growth and grain yield. Of various abiotic …

Mining and development of novel SSR markers using next generation sequencing (NGS) data in plants

S Taheri, T Lee Abdullah, MR Yusop, MM Hanafi… - Molecules, 2018 - mdpi.com
Microsatellites, or simple sequence repeats (SSRs), are one of the most informative and
multi-purpose genetic markers exploited in plant functional genomics. However, the …

A chromosome-based draft sequence of the hexaploid bread wheat (Triticum aestivum) genome

International Wheat Genome Sequencing Consortium … - Science, 2014 - science.org
An ordered draft sequence of the 17-gigabase hexaploid bread wheat (Triticum aestivum)
genome has been produced by sequencing isolated chromosome arms. We have annotated …

Analysis of the bread wheat genome using whole-genome shotgun sequencing

R Brenchley, M Spannagl, M Pfeifer, GLA Barker… - Nature, 2012 - nature.com
Bread wheat (Triticum aestivum) is a globally important crop, accounting for 20 per cent of
the calories consumed by humans. Major efforts are underway worldwide to increase wheat …

Genome sequencing and analysis of the model grass Brachypodium distachyon

DNA sequencing and assembly Barry Kerrie 5 Lucas … - Nature, 2010 - nature.com
Three subfamilies of grasses, the Ehrhartoideae, Panicoideae and Pooideae, provide the
bulk of human nutrition and are poised to become major sources of renewable energy. Here …

Draft genome of the wheat A-genome progenitor Triticum urartu

HQ Ling, S Zhao, D Liu, J Wang, H Sun, C Zhang… - Nature, 2013 - nature.com
Bread wheat (Triticum aestivum, AABBDD) is one of the most widely cultivated and
consumed food crops in the world. However, the complex polyploid nature of its genome …

Aegilops tauschii draft genome sequence reveals a gene repertoire for wheat adaptation

J Jia, S Zhao, X Kong, Y Li, G Zhao, W He, R Appels… - Nature, 2013 - nature.com
About 8,000 years ago in the Fertile Crescent, a spontaneous hybridization of the wild
diploid grass Aegilops tauschii (2 n= 14; DD) with the cultivated tetraploid wheat Triticum …

BatchPrimer3: a high throughput web application for PCR and sequencing primer design

FM You, N Huo, YQ Gu, M Luo, Y Ma, D Hane… - BMC …, 2008 - Springer
Background Microsatellite (simple sequence repeat–SSR) and single nucleotide
polymorphism (SNP) markers are two types of important genetic markers useful in genetic …

Structural and functional partitioning of bread wheat chromosome 3B

F Choulet, A Alberti, S Theil, N Glover, V Barbe… - Science, 2014 - science.org
We produced a reference sequence of the 1-gigabase chromosome 3B of hexaploid bread
wheat. By sequencing 8452 bacterial artificial chromosomes in pools, we assembled a …

Unlocking the barley genome by chromosomal and comparative genomics

KFX Mayer, M Martis, PE Hedley, H Šimková… - The Plant …, 2011 - academic.oup.com
We used a novel approach that incorporated chromosome sorting, next-generation
sequencing, array hybridization, and systematic exploitation of conserved synteny with …