Structure‐Based Drug Discovery with Deep Learning
Artificial intelligence (AI) in the form of deep learning has promise for drug discovery and
chemical biology, for example, to predict protein structure and molecular bioactivity, plan …
chemical biology, for example, to predict protein structure and molecular bioactivity, plan …
Designing drugs and chemical probes with the dualsteric approach
J Zha, J He, C Wu, M Zhang, X Liu… - Chemical Society Reviews, 2023 - pubs.rsc.org
Traditionally, drugs are monovalent, targeting only one site on the protein surface. This
includes orthosteric and allosteric drugs, which bind the protein at orthosteric and allosteric …
includes orthosteric and allosteric drugs, which bind the protein at orthosteric and allosteric …
G protein-coupled receptors (GPCRs): advances in structures, mechanisms, and drug discovery
M Zhang, T Chen, X Lu, X Lan, Z Chen… - Signal Transduction and …, 2024 - nature.com
G protein-coupled receptors (GPCRs), the largest family of human membrane proteins and
an important class of drug targets, play a role in maintaining numerous physiological …
an important class of drug targets, play a role in maintaining numerous physiological …
Mechanistic insights into the long-range allosteric regulation of KRAS via neurofibromatosis type 1 (NF1) scaffold upon SPRED1 loading
M Li, Y Wang, J Fan, H Zhuang, Y Liu, D Ji… - Journal of Molecular …, 2022 - Elsevier
Allosteric regulation is the most direct and efficient way of regulating protein function,
wherein proteins transmit the perturbations at one site to another distinct functional site …
wherein proteins transmit the perturbations at one site to another distinct functional site …
AlloReverse: multiscale understanding among hierarchical allosteric regulations
Increasing data in allostery are requiring analysis of coupling relationships among different
allosteric sites on a single protein. Here, based on our previous efforts on reversed allosteric …
allosteric sites on a single protein. Here, based on our previous efforts on reversed allosteric …
Progressive computational approaches to facilitate decryption of allosteric mechanism and drug discovery
X Lu, X Lan, S Lu, J Zhang - Current Opinion in Structural Biology, 2023 - Elsevier
Allostery is a ubiquitous biological phenomenon where perturbation at topologically distal
areas of a protein serves as a trigger to fine-tune the orthosteric site and thus regulate …
areas of a protein serves as a trigger to fine-tune the orthosteric site and thus regulate …
Harnessing reversed allosteric communication: a novel strategy for allosteric drug discovery
J Fan, Y Liu, R Kong, D Ni, Z Yu, S Lu… - Journal of Medicinal …, 2021 - ACS Publications
Allostery is a fundamental and extensive mechanism of intramolecular signal transmission.
Allosteric drugs possess several unique pharmacological advantages over traditional …
Allosteric drugs possess several unique pharmacological advantages over traditional …
[HTML][HTML] Allosteric communication and signal transduction in proteins
Allostery is one of the cornerstones of biological function, as it plays a fundamental role in
regulating protein activity. The modelling of allostery has gradually moved from a …
regulating protein activity. The modelling of allostery has gradually moved from a …
Molecular dynamics simulations establish the molecular basis for the broad allostery hotspot distributions in the tetracycline repressor
It is imperative to identify the network of residues essential to the allosteric coupling for the
purpose of rationally engineering allostery in proteins. Deep mutational scanning analysis …
purpose of rationally engineering allostery in proteins. Deep mutational scanning analysis …
Green and efficient one-pot three-component synthesis of novel drug-like furo [2, 3-d] pyrimidines as potential active site inhibitors and putative allosteric hotspots …
In this paper, an environmentally benign, convenient, and efficient one-pot three-component
reaction has been developed for the regioselective synthesis of novel 5-aroyl (or …
reaction has been developed for the regioselective synthesis of novel 5-aroyl (or …