[BOOK][B] Introduction to proteins: structure, function, and motion

A Kessel, N Ben-Tal - 2018 - taylorfrancis.com
Introduction to Proteins provides a comprehensive and state-of-the-art introduction to the
structure, function, and motion of proteins for students, faculty, and researchers at all levels …

Aromatic patterns: Tryptophan aromaticity as a catalyst for the emergence of life and rise of consciousness

A Alachkar - Physics of Life Reviews, 2022 - Elsevier
Sunlight held the key to the origin of life on Earth. The earliest life forms, cyanobacteria,
captured the sunlight to generate energy through photosynthesis. Life on Earth evolved in …

Non-Markovianity, coherence, and system-environment correlations in a long-range collision model

B Çakmak, M Pezzutto, M Paternostro… - Physical Review A, 2017 - APS
We consider the dynamics of a collisional model in which both the system and environment
are embodied by spin-1/2 particles. In order to include non-Markovian features in our model …

Using non-Markovian measures to evaluate quantum master equations for photosynthesis

HB Chen, N Lambert, YC Cheng, YN Chen, F Nori - Scientific reports, 2015 - nature.com
When dealing with system-reservoir interactions in an open quantum system, such as a
photosynthetic light-harvesting complex, approximations are usually made to obtain the …

Unveiling the nonclassicality within quasi-distribution representations through deep learning

HB Chen, CH Liu, KL Lai, BY Tseng… - Quantum Science …, 2024 - iopscience.iop.org
To unequivocally distinguish genuine quantumness from classicality, a widely adopted
approach focuses on the negative values of a quasi-distribution representation as …

Thermal production, protection, and heat exchange of quantum coherences

B Çakmak, A Manatuly, ÖE Müstecaplıoğlu - Physical Review A, 2017 - APS
We consider finite-sized atomic systems with varying number of particles which have dipolar
interactions among them and are also under the collective driving and dissipative effect of a …

Vibration-induced coherence enhancement of the performance of a biological quantum heat engine

HB Chen, PY Chiu, YN Chen - Physical Review E, 2016 - APS
Photosynthesis has been a long-standing research interest due to its fundamental
importance. Recently, studies on photosynthesis processes also have inspired attention …

Gaussian interferometric power as a measure of continuous-variable non-Markovianity

LAM Souza, HS Dhar, MN Bera, P Liuzzo-Scorpo… - Physical Review A, 2015 - APS
We investigate the non-Markovianity of continuous-variable Gaussian quantum channels
through the evolution of an operational metrological quantifier, namely, the Gaussian …

Canonical Hamiltonian ensemble representation of dephasing dynamics and the impact of thermal fluctuations on quantum-to-classical transition

HB Chen, YN Chen - Scientific reports, 2021 - nature.com
An important mathematical tool for studying open quantum system theory, which studies the
dynamics of a reduced system, is the completely positive and trace-preserving dynamical …

Influence of the coupled-dipoles on photosynthetic performance in a photosynthetic quantum heat engine

LF Li, SC Zhao - Chinese Physics B, 2021 - iopscience.iop.org
Recent evidence suggests that the multiple charge-separation pathways can contribute to
photosynthetic performance. In this work, the influence of coupled-dipoles on photosynthetic …