Genomic imprinting and parent-of-origin effects on complex traits

HA Lawson, JM Cheverud, JB Wolf - Nature Reviews Genetics, 2013 - nature.com
Parent-of-origin effects occur when the phenotypic effect of an allele depends on whether it
is inherited from the mother or the father. Several phenomena can cause parent-of-origin …

[KIRJA][B] Using heterogeneous stocks for fine-map** genetically complex traits

LC Solberg Woods, AA Palmer - 2019 - Springer
In this chapter we will review both the rationale and experimental design for using
Heterogeneous Stock (HS) populations for fine-map** of complex traits in mice and rats …

Epigenetics of progression of chronic kidney disease: fact or fantasy?

MR Wing, A Ramezani, HS Gill, JM Devaney… - Seminars in …, 2013 - Elsevier
Epigenetic modifications are important in the normal functioning of the cell, from regulating
dynamic expression of essential genes and associated proteins to repressing those that are …

Genetic, epigenetic, and environmental mechanisms govern allele-specific gene expression

CLS Pierre, JF Macias-Velasco, JP Wayhart… - Genome …, 2022 - genome.cshlp.org
Allele-specific expression (ASE) is a phenomenon in which one allele is preferentially
expressed over the other. Genetic and epigenetic factors cause ASE by altering the final …

Parent-of-origin effects propagate through networks to shape metabolic traits

JF Macias-Velasco, CL St Pierre, JP Wayhart, L Yin… - Elife, 2022 - elifesciences.org
Parent-of-origin effects are unexpectedly common in complex traits, including metabolic and
neurological traits. Parent-of-origin effects can be modified by the environment, but the …

Signaling mechanisms in the restoration of impaired immune function due to diet-induced obesity

Q Zhou, SE Leeman, S Amar - Proceedings of the National Academy of …, 2011 - pnas.org
Our previous data have linked obesity with immune dysfunction. It is known that physical
exercise with dietary control has beneficial effects on immune function and the comorbidities …

Genetic effects at pleiotropic loci are context-dependent with consequences for the maintenance of genetic variation in populations

HA Lawson, JE Cady, C Partridge, JB Wolf… - PLoS …, 2011 - journals.plos.org
Context-dependent genetic effects, including genotype-by-environment and genotype-by-
sex interactions, are a potential mechanism by which genetic variation of complex traits is …

Using whole-genome sequences of the LG/J and SM/J inbred mouse strains to prioritize quantitative trait genes and nucleotides

I Nikolskiy, DF Conrad, S Chun, JC Fay, JM Cheverud… - BMC genomics, 2015 - Springer
Background The laboratory mouse is the most commonly used model for studying variation
in complex traits relevant to human disease. Here we present the whole-genome sequences …

Fine-map** QTLs in advanced intercross lines and other outbred populations

NM Gonzales, AA Palmer - Mammalian genome, 2014 - Springer
Quantitative genetic studies in model organisms, particularly in mice, have been extremely
successful in identifying chromosomal regions that are associated with a wide variety of …

The effect of dietary fat intake on hepatic gene expression in LG/J AND SM/J mice

CG Partridge, GL Fawcett, B Wang, CF Semenkovich… - BMC genomics, 2014 - Springer
Background The liver plays a major role in regulating metabolic homeostasis and is vital for
nutrient metabolism. Identifying the genetic factors regulating these processes could lead to …