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Adaptive immune receptor repertoire analysis
B cell and T cell receptor repertoires compose the adaptive immune receptor repertoire
(AIRR) of an individual. The AIRR is a unique collection of antigen-specific receptors that …
(AIRR) of an individual. The AIRR is a unique collection of antigen-specific receptors that …
Machine-designed biotherapeutics: opportunities, feasibility and advantages of deep learning in computational antibody discovery
W Wilman, S Wróbel, W Bielska… - Briefings in …, 2022 - academic.oup.com
Antibodies are versatile molecular binders with an established and growing role as
therapeutics. Computational approaches to develo** and designing these molecules are …
therapeutics. Computational approaches to develo** and designing these molecules are …
[HTML][HTML] Potent neutralizing antibodies against SARS-CoV-2 identified by high-throughput single-cell sequencing of convalescent patients' B cells
The COVID-19 pandemic urgently needs therapeutic and prophylactic interventions. Here,
we report the rapid identification of SARS-CoV-2-neutralizing antibodies by high-throughput …
we report the rapid identification of SARS-CoV-2-neutralizing antibodies by high-throughput …
Deciphering the language of antibodies using self-supervised learning
An individual's B cell receptor (BCR) repertoire encodes information about past immune
responses and potential for future disease protection. Deciphering the information stored in …
responses and potential for future disease protection. Deciphering the information stored in …
Observed antibody space: a resource for data mining next-generation sequencing of antibody repertoires
Abs are immune system proteins that recognize noxious molecules for elimination. Their
sequence diversity and binding versatility have made Abs the primary class of …
sequence diversity and binding versatility have made Abs the primary class of …
Accelerating antibody discovery and design with artificial intelligence: Recent advances and prospects
G Bai, C Sun, Z Guo, Y Wang, X Zeng, Y Su… - Seminars in Cancer …, 2023 - Elsevier
Therapeutic antibodies are the largest class of biotherapeutics and have been successful in
treating human diseases. However, the design and discovery of antibody drugs remains …
treating human diseases. However, the design and discovery of antibody drugs remains …
The evolutionary and functional significance of germline immunoglobulin gene variation
The recombination between immunoglobulin (IG) gene segments determines an individual's
naïve antibody repertoire and, consequently,(auto) antigen recognition. Emerging evidence …
naïve antibody repertoire and, consequently,(auto) antigen recognition. Emerging evidence …
How repertoire data are changing antibody science
C Marks, CM Deane - Journal of Biological Chemistry, 2020 - jbc.org
Antibodies are vital proteins of the immune system that recognize potentially harmful
molecules and initiate their removal. Mammals can efficiently create vast numbers of …
molecules and initiate their removal. Mammals can efficiently create vast numbers of …
Comparative analysis of the CDR loops of antigen receptors
The adaptive immune system uses two main types of antigen receptors: T-cell receptors
(TCRs) and antibodies. While both proteins share a globally similar β-sandwich architecture …
(TCRs) and antibodies. While both proteins share a globally similar β-sandwich architecture …
Epitope profiling using computational structural modelling demonstrated on coronavirus-binding antibodies
Identifying the epitope of an antibody is a key step in understanding its function and its
potential as a therapeutic. Sequence-based clonal clustering can identify antibodies with …
potential as a therapeutic. Sequence-based clonal clustering can identify antibodies with …