MetaboAnalyst 3.0—making metabolomics more meaningful
Abstract MetaboAnalyst (www. metaboanalyst. ca) is a web server designed to permit
comprehensive metabolomic data analysis, visualization and interpretation. It supports a …
comprehensive metabolomic data analysis, visualization and interpretation. It supports a …
NetworkAnalyst for statistical, visual and network-based meta-analysis of gene expression data
Meta-analysis of gene expression data sets is increasingly performed to help identify robust
molecular signatures and to gain insights into underlying biological processes. The …
molecular signatures and to gain insights into underlying biological processes. The …
NetworkAnalyst-integrative approaches for protein–protein interaction network analysis and visual exploration
Biological network analysis is a powerful approach to gain systems-level understanding of
patterns of gene expression in different cell types, disease states and other biological …
patterns of gene expression in different cell types, disease states and other biological …
[HTML][HTML] CXCL14, a brown adipokine that mediates brown-fat-to-macrophage communication in thermogenic adaptation
The beneficial effects of brown adipose tissue (BAT) are attributed to its capacity to oxidize
metabolites and produce heat, but recent data suggest that secretory properties of BAT may …
metabolites and produce heat, but recent data suggest that secretory properties of BAT may …
ETE: a python Environment for Tree Exploration
Background Many bioinformatics analyses, ranging from gene clustering to phylogenetics,
produce hierarchical trees as their main result. These are used to represent the relationships …
produce hierarchical trees as their main result. These are used to represent the relationships …
Plant adaptation and tolerance to environmental stresses: mechanisms and perspectives
A Raza, F Ashraf, X Zou, X Zhang, H Tosif - Plant ecophysiology and …, 2020 - Springer
Environmental stresses such as waterlogging, drought, salinity, high and low temperature,
and elevated CO 2 levels affect plant development and pose an increasing warning to …
and elevated CO 2 levels affect plant development and pose an increasing warning to …
Convergence of biomarkers, bioinformatics and nanotechnology for individualized cancer treatment
Recent advances in biomarker discovery, biocomputing and nanotechnology have raised
new opportunities in the emerging fields of personalized medicine (in which disease …
new opportunities in the emerging fields of personalized medicine (in which disease …
INMEX—a web-based tool for integrative meta-analysis of expression data
The widespread applications of various 'omics' technologies in biomedical research together
with the emergence of public data repositories have resulted in a plethora of data sets for …
with the emergence of public data repositories have resulted in a plethora of data sets for …
Integrative genomic and proteomic analyses identify targets for Lkb1-deficient metastatic lung tumors
J Carretero, T Shimamura, K Rikova, AL Jackson… - Cancer cell, 2010 - cell.com
In mice, Lkb1 deletion and activation of Kras G12D results in lung tumors with a high
penetrance of lymph node and distant metastases. We analyzed these primary and …
penetrance of lymph node and distant metastases. We analyzed these primary and …
Prerequisites, performance and profits of transcriptional profiling the abiotic stress response
J Kilian, F Peschke, KW Berendzen, K Harter… - … et Biophysica Acta (BBA …, 2012 - Elsevier
During the last decade, microarrays became a routine tool for the analysis of transcripts in
the model plant Arabidopsis thaliana and the crop plant species rice, poplar or barley. The …
the model plant Arabidopsis thaliana and the crop plant species rice, poplar or barley. The …