Review of clinical next-generation sequencing

S Yohe, B Thyagarajan - Archives of pathology & …, 2017‏ - meridian.allenpress.com
Context.—Next-generation sequencing (NGS) is a technology being used by many
laboratories to test for inherited disorders and tumor mutations. This technology is new for …

A copy number variation map of the human genome

M Zarrei, JR MacDonald, D Merico… - Nature reviews …, 2015‏ - nature.com
A major contribution to the genome variability among individuals comes from deletions and
duplications—collectively termed copy number variations (CNVs)—which alter the diploid …

Rare coding variation provides insight into the genetic architecture and phenotypic context of autism

JM Fu, FK Satterstrom, M Peng, H Brand, RL Collins… - Nature …, 2022‏ - nature.com
Some individuals with autism spectrum disorder (ASD) carry functional mutations rarely
observed in the general population. We explored the genes disrupted by these variants from …

Convergence of genes and cellular pathways dysregulated in autism spectrum disorders

D Pinto, E Delaby, D Merico, M Barbosa… - The American Journal of …, 2014‏ - cell.com
Rare copy-number variation (CNV) is an important source of risk for autism spectrum
disorders (ASDs). We analyzed 2,446 ASD-affected families and confirmed an excess of …

Whole-genome sequencing expands diagnostic utility and improves clinical management in paediatric medicine

DJ Stavropoulos, D Merico, R Jobling, S Bowdin… - NPJ genomic …, 2016‏ - nature.com
The standard of care for first-tier clinical investigation of the aetiology of congenital
malformations and neurodevelopmental disorders is chromosome microarray analysis …

De novo CNV analysis implicates specific abnormalities of postsynaptic signalling complexes in the pathogenesis of schizophrenia

G Kirov, AJ Pocklington, P Holmans, D Ivanov… - Molecular …, 2012‏ - nature.com
A small number of rare, recurrent genomic copy number variants (CNVs) are known to
substantially increase susceptibility to schizophrenia. As a consequence of the low fecundity …

Machine learning for genetic prediction of psychiatric disorders: a systematic review

M Bracher-Smith, K Crawford, V Escott-Price - Molecular Psychiatry, 2021‏ - nature.com
Abstract Machine learning methods have been employed to make predictions in psychiatry
from genotypes, with the potential to bring improved prediction of outcomes in psychiatric …

Detectable clonal mosaicism and its relationship to aging and cancer

KB Jacobs, M Yeager, W Zhou, S Wacholder, Z Wang… - Nature …, 2012‏ - nature.com
In an analysis of 31,717 cancer cases and 26,136 cancer-free controls from 13 genome-
wide association studies, we observed large chromosomal abnormalities in a subset of …

Generation of isogenic pluripotent stem cells differing exclusively at two early onset Parkinson point mutations

F Soldner, J Laganière, AW Cheng, D Hockemeyer… - Cell, 2011‏ - cell.com
Patient-specific induced pluripotent stem cells (iPSCs) derived from somatic cells provide a
unique tool for the study of human disease, as well as a promising source for cell …

Detection of clinically relevant genetic variants in autism spectrum disorder by whole-genome sequencing

Y Jiang, RKC Yuen, X **, M Wang, N Chen… - The American Journal of …, 2013‏ - cell.com
Autism Spectrum Disorder (ASD) demonstrates high heritability and familial clustering, yet
the genetic causes remain only partially understood as a result of extensive clinical and …