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A field guide to eukaryotic transposable elements
JN Wells, C Feschotte - Annual review of genetics, 2020 - annualreviews.org
Transposable elements (TEs) are mobile DNA sequences that propagate within genomes.
Through diverse invasion strategies, TEs have come to occupy a substantial fraction of …
Through diverse invasion strategies, TEs have come to occupy a substantial fraction of …
Origins and evolution of CRISPR-Cas systems
EV Koonin, KS Makarova - Philosophical Transactions of …, 2019 - royalsocietypublishing.org
CRISPR-Cas, the bacterial and archaeal adaptive immunity systems, encompass a complex
machinery that integrates fragments of foreign nucleic acids, mostly from mobile genetic …
machinery that integrates fragments of foreign nucleic acids, mostly from mobile genetic …
Insights into mammalian TE diversity through the curation of 248 genome assemblies
We examined transposable element (TE) content of 248 placental mammal genome
assemblies, the largest de novo TE curation effort in eukaryotes to date. We found that …
assemblies, the largest de novo TE curation effort in eukaryotes to date. We found that …
Evolutionary entanglement of mobile genetic elements and host defence systems: guns for hire
EV Koonin, KS Makarova, YI Wolf… - Nature Reviews …, 2020 - nature.com
All cellular life forms are afflicted by diverse genetic parasites, including viruses and other
types of mobile genetic elements (MGEs), and have evolved multiple, diverse defence …
types of mobile genetic elements (MGEs), and have evolved multiple, diverse defence …
Large-scale invasion of unicellular eukaryotic genomes by integrating DNA viruses
Eukaryotic genomes contain a variety of endogenous viral elements (EVEs), which are
mostly derived from RNA and ssDNA viruses that are no longer functional and are …
mostly derived from RNA and ssDNA viruses that are no longer functional and are …
Evolution and diversity of transposable elements in vertebrate genomes
Transposable elements (TEs) are selfish genetic elements that mobilize in genomes via
transposition or retrotransposition and often make up large fractions of vertebrate genomes …
transposition or retrotransposition and often make up large fractions of vertebrate genomes …
A unified classification system for eukaryotic transposable elements
Our knowledge of the structure and composition of genomes is rapidly progressing in pace
with their sequencing. The emerging data show that a significant portion of eukaryotic …
with their sequencing. The emerging data show that a significant portion of eukaryotic …
Endogenous virophages are active and mitigate giant virus infection in the marine protist Cafeteria burkhardae
Endogenous viral elements (EVEs) are common genetic passengers in various protists.
Some EVEs represent viral fossils, whereas others are still active. The marine heterotrophic …
Some EVEs represent viral fossils, whereas others are still active. The marine heterotrophic …
DNA transposons and the evolution of eukaryotic genomes
C Feschotte, EJ Pritham - Annu. Rev. Genet., 2007 - annualreviews.org
Transposable elements are mobile genetic units that exhibit broad diversity in their structure
and transposition mechanisms. Transposable elements occupy a large fraction of many …
and transposition mechanisms. Transposable elements occupy a large fraction of many …
Viruses defined by the position of the virosphere within the replicator space
Originally, viruses were defined as miniscule infectious agents that passed through filters
that retain even the smallest cells. Subsequently, viruses were considered obligate …
that retain even the smallest cells. Subsequently, viruses were considered obligate …