Exploring associations of non-coding RNAs in human diseases via three-matrix factorization with hypergraph-regular terms on center kernel alignment

H Wang, J Tang, Y Ding, F Guo - Briefings in Bioinformatics, 2021 - academic.oup.com
Relationship of accurate associations between non-coding RNAs and diseases could be of
great help in the treatment of human biomedical research. However, the traditional …

Low rank matrix factorization algorithm based on multi-graph regularization for detecting drug-disease association

C Ai, H Yang, Y Ding, J Tang… - IEEE/ACM Transactions …, 2023 - ieeexplore.ieee.org
Detecting potential associations between drugs and diseases plays an indispensable role in
drug development, which has also become a research hotspot in recent years. Compared …

Line graph contrastive learning for link prediction

Z Zhang, S Sun, G Ma, C Zhong - Pattern Recognition, 2023 - Elsevier
Link prediction tasks focus on predicting possible future connections. Most existing
researches measure the likelihood of links by different similarity scores on node pairs and …

Drug–disease associations prediction via multiple kernel-based dual graph regularized least squares

H Yang, Y Ding, J Tang, F Guo - Applied Soft Computing, 2021 - Elsevier
Predicting associations in drug–disease network provides effective information for the drug
repositioning. Therefore, it is an important task to develop an effective drug–disease …

A multi-layer multi-kernel neural network for determining associations between non-coding RNAs and diseases

C Ai, H Yang, Y Ding, J Tang, F Guo - Neurocomputing, 2022 - Elsevier
Identification of associations between non-coding RNAs and diseases plays an important
role in the study of pathogenesis, which has been a hot topic in recent research. However …

Research on cloud manufacturing service recommendation based on graph neural network

M Li, X Shi, Y Shi, Y Cai, X Dong - Plos one, 2023 - journals.plos.org
There are an increasing number of manufacturing service resources appeared on the cloud
manufacturing (CMfg) service platform recently, which leads to a serious information …

Link prediction on bipartite networks using matrix factorization with negative sample selection

S Peng, A Yamamoto, K Ito - Plos one, 2023 - journals.plos.org
We propose a new method for bipartite link prediction using matrix factorization with
negative sample selection. Bipartite link prediction is a problem that aims to predict the …

ULW-DMM: an effective topic modeling method for microblog short text

J Yu, L Qiu - IEEE Access, 2018 - ieeexplore.ieee.org
With the popularity of social media, including micro-blog, mining effective information in
short texts has become an increasingly important issue. However, due to the sparseness …

Link prediction in bipartite networks via deep autoencoder-like nonnegative matrix factorization

W Yu, J Fu, Y Zhao, H Shi, X Chen, S Shen… - Applied Soft Computing, 2025 - Elsevier
A bipartite network is a special type of network structure that possesses unique value and
practical significance in numerous fields, including recommender systems, social networks …

Link prediction in bipartite networks via effective integration of explicit and implicit relations

X Chen, C Liu, X Li, Y Sun, W Yu, P Jiao - Neurocomputing, 2024 - Elsevier
Link prediction in bipartite networks aims to identify or predict possible links between nodes
of different types based on known network information. However, most existing studies …