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Cross-feeding in the gut microbiome: ecology and mechanisms
Microbial communities are shaped by positive and negative interactions ranging from
competition to mutualism. In the context of the mammalian gut and its microbial inhabitants …
competition to mutualism. In the context of the mammalian gut and its microbial inhabitants …
The ecological roles of bacterial chemotaxis
How bacterial chemotaxis is performed is much better understood than why. Traditionally,
chemotaxis has been understood as a foraging strategy by which bacteria enhance their …
chemotaxis has been understood as a foraging strategy by which bacteria enhance their …
Mitochondrial ATP generation is more proteome efficient than glycolysis
Metabolic efficiency profoundly influences organismal fitness. Nonphotosynthetic organisms,
from yeast to mammals, derive usable energy primarily through glycolysis and respiration …
from yeast to mammals, derive usable energy primarily through glycolysis and respiration …
Inter-bacterial mutualism promoted by public goods in a system characterized by deterministic temperature variation
Mutualism is commonly observed in nature but not often reported for bacterial communities.
Although abiotic stress is thought to promote microbial mutualism, there is a paucity of …
Although abiotic stress is thought to promote microbial mutualism, there is a paucity of …
[HTML][HTML] Increased demand for NAD+ relative to ATP drives aerobic glycolysis
Aerobic glycolysis, or preferential fermentation of glucose-derived pyruvate to lactate despite
available oxygen, is associated with proliferation across many organisms and conditions. To …
available oxygen, is associated with proliferation across many organisms and conditions. To …
Strength of species interactions determines biodiversity and stability in microbial communities
Organisms—especially microbes—tend to live together in ecosystems. While some of these
ecosystems are very biodiverse, others are not, and while some are very stable over time …
ecosystems are very biodiverse, others are not, and while some are very stable over time …
Emergent simplicity in microbial community assembly
A major unresolved question in microbiome research is whether the complex taxonomic
architectures observed in surveys of natural communities can be explained and predicted by …
architectures observed in surveys of natural communities can be explained and predicted by …
Trophic interactions and the drivers of microbial community assembly
Despite numerous surveys of gene and species content in heterotrophic microbial
communities, such as those found in animal guts, oceans, or soils, it is still unclear whether …
communities, such as those found in animal guts, oceans, or soils, it is still unclear whether …
Verrucomicrobia use hundreds of enzymes to digest the algal polysaccharide fucoidan
A Sichert, CH Corzett, MS Schechter, F Unfried… - Nature …, 2020 - nature.com
Brown algae are important players in the global carbon cycle by fixing carbon dioxide into 1
Gt of biomass annually, yet the fate of fucoidan—their major cell wall polysaccharide …
Gt of biomass annually, yet the fate of fucoidan—their major cell wall polysaccharide …
Sha** of microbial phenotypes by trade-offs
M Zhu, X Dai - Nature Communications, 2024 - nature.com
Growth rate maximization is an important fitness strategy for microbes. However, the wide
distribution of slow-growing oligotrophic microbes in ecosystems suggests that rapid growth …
distribution of slow-growing oligotrophic microbes in ecosystems suggests that rapid growth …