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Design of functional metalloproteins
Metalloproteins catalyse some of the most complex and important processes in nature, such
as photosynthesis and water oxidation. An ultimate test of our knowledge of how …
as photosynthesis and water oxidation. An ultimate test of our knowledge of how …
Designing hydrolytic zinc metalloenzymes
Zinc is an essential element required for the function of more than 300 enzymes spanning all
classes. Despite years of dedicated study, questions regarding the connections between …
classes. Despite years of dedicated study, questions regarding the connections between …
Metal-mediated affinity and orientation specificity in a computationally designed protein homodimer
BS Der, M Machius, MJ Miley, JL Mills… - Journal of the …, 2012 - ACS Publications
Computationally designing protein–protein interactions with high affinity and desired
orientation is a challenging task. Incorporating metal-binding sites at the target interface may …
orientation is a challenging task. Incorporating metal-binding sites at the target interface may …
Molecular biomimetics: nanotechnology and bionanotechnology using genetically engineered peptides
C Tamerler, M Sarikaya - Philosophical Transactions of …, 2009 - royalsocietypublishing.org
Nature provides inspiration for designing materials and systems that derive their functions
from highly organized structures. Biological hard tissues are hybrid materials having …
from highly organized structures. Biological hard tissues are hybrid materials having …
mFASD: a structure-based algorithm for discriminating different types of metal-binding sites
Motivation: A large number of proteins contain metal ions that are essential for their stability
and biological activity. Identifying and characterizing metal-binding sites through …
and biological activity. Identifying and characterizing metal-binding sites through …
PinMyMetal: A hybrid learning system to accurately model metal binding sites in macromolecules
H Zheng, H Zhang, J Zhong, M Gucwa… - Research …, 2024 - pmc.ncbi.nlm.nih.gov
Metal ions are vital components in many proteins for the inference and engineering of
protein function, with coordination complexity linked to structural (4-residue predominate) …
protein function, with coordination complexity linked to structural (4-residue predominate) …
Structure-based de novo prediction of zinc-binding sites in proteins of unknown function
Motivation: Zinc-binding proteins are the most abundant metallo-proteins in Protein Data
Bank (PDB). Accurate prediction of zinc-binding sites in proteins of unknown function may …
Bank (PDB). Accurate prediction of zinc-binding sites in proteins of unknown function may …
Fundamentals of bio-based technologies for selective metal recovery from bio-leachates and liquid waste streams
A Sieber, S Spiess, WY Rassy, D Schild… - … in Bioengineering and …, 2025 - frontiersin.org
The number of metal-containing waste streams resulting from electronic end-of life products,
metallurgical by-products, and mine tailings to name but a few, is increasing worldwide. In …
metallurgical by-products, and mine tailings to name but a few, is increasing worldwide. In …
An integrative computational framework based on a two-step random forest algorithm improves prediction of zinc-binding sites in proteins
Zinc-binding proteins are the most abundant metalloproteins in the Protein Data Bank where
the zinc ions usually have catalytic, regulatory or structural roles critical for the function of the …
the zinc ions usually have catalytic, regulatory or structural roles critical for the function of the …
Effect of distal histidines on hydrogen peroxide activation by manganese reconstituted myoglobin
YB Cai, XH Li, J **g, JL Zhang - Metallomics, 2013 - academic.oup.com
Myoglobins provide an opportunity to investigate the effect of the secondary coordination
sphere on the functionality and reactivity of non-native metal porphyrins inside well-defined …
sphere on the functionality and reactivity of non-native metal porphyrins inside well-defined …