The explosion of bioinformatics technologies in the form of next generation sequencing
(NGS) has facilitated a massive influx of genomics data in the form of short reads. Short read …

Several studies have proved the benefits of job malleability, that is, the capacity of an
application to adapt its parallelism to a dynamically changing number of allocated …

The advances in genomic sequencing during the past few years have motivated the
development of fast and reliable software for DNA/RNA sequencing on current high …

In this paper we introduce a workflow-based aligner for fast and accurate map** of short
RNA sequences on a cluster of server nodes equipped with multicore processors. Our …

We present Sprite, a bioinformatic data analysis pipeline for detecting single nucleotide
polymorphisms (SNPs) in the human genome. A SNP detection pipeline for next-generation …

We introduce a parallel aligner with a work-flow organization for fast and accurate map**
of RNA sequences on servers equipped with multicore processors. Our software, HPG …

Due to the NGS data deluge, sequence map** has become an intensive task that,
depending on the experiment, may demand high amounts of computing power or memory …

Due to the NGS data deluge, sequence map** has become an intensive task that,
depending on the experiment, may demand high amounts of computing power or memory …

The microbiome, defined as the vast number of microorganisms inhabiting both human and
non-human environments, has been associated with human disease as well as other …

This proposal addresses, from two different approaches, the improvement of data centers
productivity through an efficient resource management. On the one hand, the combination of …