Automating the extraction of information from a historical text and building a linked data model for the domain of ecology and conservation science

V Nundloll, R Smail, C Stevens, G Blair - Heliyon, 2022 - cell.com
Data heterogeneity is a pressing issue and is further compounded if we have to deal with
data from textual documents. The unstructured nature of such documents implies that …

Computational literature-based discovery for natural products research: current state and future prospects

A Lardos, A Aghaebrahimian, A Koroleva… - Frontiers in …, 2022 - frontiersin.org
Literature-based discovery (LBD) mines existing literature in order to generate new
hypotheses by finding links between previously disconnected pieces of knowledge …

[HTML][HTML] A knowledge graph-based data harmonization framework for secondary data reuse

F Abad-Navarro, C Martínez-Costa - Computer Methods and Programs in …, 2024 - Elsevier
Background and objective The adoption of new technologies in clinical care systems has
propitiated the availability of a great amount of valuable data. However, this data is usually …

[HTML][HTML] MONTRA2: A web platform for profiling distributed databases in the health domain

JR Almeida, JL Oliveira - Informatics in Medicine Unlocked, 2024 - Elsevier
Background: Data catalogues are used in multiple domains to provide an overview of
databases' characteristics without releasing the actual data. Despite the existence of several …

IPDS: A semantic mediator‐based system using Spark for the integration of heterogeneous proteomics data sources

C Messaoudi, R Fissoune… - … and Computation: Practice …, 2021 - Wiley Online Library
With the constant rise of data volumes in many disciplines, various new Big data
management systems have emerged to provide scalable tools for efficient data integration …

Semantic bridge for resolving healthcare data interoperability

FA Satti, WA Khan, T Ali, J Hussain… - 2020 International …, 2020 - ieeexplore.ieee.org
Data Interoperability is a critical part of achieving healthcare interoperability. In this paper,
we present a novel methodology for automating the schema matching process at attribute …

Semantic web methods for data integration in life sciences

O Dameron - Biological Data Integration: Computer and …, 2024 - books.google.com
The life sciences are both inherently complicated, because of the large number of different
elements involved, and complex, because of the strong interdependence of these elements …

[HTML][HTML] The rise of natural language interfaces to databases

K Stockinger - ACM SIGMOD Blog, 2019 - wp.sigmod.org
The vision of natural language interfaces to databases (NLIDBs) is to make data stores more
accessible for a wide range of non-tech savvy end users with the ultimate goal to talk to a …

A hands-on introduction to querying evolutionary relationships across multiple data sources using SPARQL

AC Sima, C Dessimoz, K Stockinger… - …, 2020 - pmc.ncbi.nlm.nih.gov
The increasing use of Semantic Web technologies in the life sciences, in particular the use
of the Resource Description Framework (RDF) and the RDF query language SPARQL …

PPIntegrator: semantic integrative system for protein–protein interaction and application for host–pathogen datasets

YC Martins, A Ziviani… - Bioinformatics …, 2023 - academic.oup.com
Semantic web standards have shown importance in the last 20 years in promoting data
formalization and interlinking between the existing knowledge graphs. In this context …