PEPPI-MS: gel-based sample pre-fractionation for deep top-down and middle-down proteomics
Top-down analysis of intact proteins and middle-down analysis of proteins subjected to
limited digestion require efficient detection of traces of proteoforms in samples, necessitating …
limited digestion require efficient detection of traces of proteoforms in samples, necessitating …
Diversifying the concept of model organisms in the age of-omics
F Bertile, S Matallana-Surget, A Tholey… - Communications …, 2023 - nature.com
In today's post-genomic era, it is crucial to rethink the concept of model organisms. While a
few historically well-established organisms, eg laboratory rodents, have enabled significant …
few historically well-established organisms, eg laboratory rodents, have enabled significant …
Modulation of α-synuclein in vitro aggregation kinetics by its alternative splice isoforms
The misfolding and aggregation of α-synuclein is linked to a family of neurodegenerative
disorders known as synucleinopathies, the most prominent of which is Parkinson's disease …
disorders known as synucleinopathies, the most prominent of which is Parkinson's disease …
Mass spectrometry-based proteomic technology and its application to study skeletal muscle cell biology
Voluntary striated muscles are characterized by a highly complex and dynamic proteome
that efficiently adapts to changed physiological demands or alters considerably during …
that efficiently adapts to changed physiological demands or alters considerably during …
IS-PRM-based peptide targeting informed by long-read sequencing for alternative proteome detection
JA Korchak, ED Jeffery, S Bandyopadhyay… - Journal of the …, 2024 - ACS Publications
Alternative splicing is a major contributor of transcriptomic complexity, but the extent to which
transcript isoforms are translated into stable, functional protein isoforms is unclear …
transcript isoforms are translated into stable, functional protein isoforms is unclear …
Soil microbiome characterization and its future directions with biosensing
L DeFord, JY Yoon - Journal of Biological Engineering, 2024 - Springer
Soil microbiome characterization is typically achieved with next-generation sequencing
(NGS) techniques. Metabarcoding is very common, and meta-omics is growing in popularity …
(NGS) techniques. Metabarcoding is very common, and meta-omics is growing in popularity …
Principal Component Analysis of Alternative Splicing Profiles Revealed by Long-Read ONT Sequencing in Human Liver Tissue and Hepatocyte-Derived HepG2 and …
E Sarygina, A Kozlova, K Deinichenko… - International Journal of …, 2023 - mdpi.com
The long-read RNA sequencing developed by Oxford Nanopore Technology provides a
direct quantification of transcript isoforms. That makes the number of transcript isoforms per …
direct quantification of transcript isoforms. That makes the number of transcript isoforms per …
Gel-Based Sample Fractionation with SP3-Purification for Top-Down Proteomics
Precise prefractionation of proteome samples is a potent method for realizing in-depth
analysis in top-down proteomics. PEPPI-MS (Passively Eluting Proteins from Polyacrylamide …
analysis in top-down proteomics. PEPPI-MS (Passively Eluting Proteins from Polyacrylamide …
[HTML][HTML] Addressing Diagnostic Gaps and Priorities of the Global Rare Diseases Community: Recommendations from the IRDiRC Diagnostics Scientific Committee
ABSTRACT The International Rare Diseases Research Consortium (IRDiRC) Diagnostic
Scientific Committee (DSC) is charged with discussion and contribution to progress on …
Scientific Committee (DSC) is charged with discussion and contribution to progress on …
Full-length transcriptome characterization and analysis of Carrizo Citrange and molecular insights into pathogen defense
R Li, Y Hu, X Wang, C Liu, G Huang - Molecular Genetics and Genomics, 2024 - Springer
Citrus huanglongbing (HLB) is a major challenge that impacts the flourishing of the citrus
industry. Therefore, analyzing the genomic information of HLB-resistant or tolerant citrus …
industry. Therefore, analyzing the genomic information of HLB-resistant or tolerant citrus …