[HTML][HTML] Environmental DNA metabarcoding for benthic monitoring: A review of sediment sampling and DNA extraction methods

J Pawlowski, K Bruce, K Panksep, FI Aguirre… - Science of the Total …, 2022 - Elsevier
Environmental DNA (eDNA) metabarcoding (parallel sequencing of DNA/RNA for
identification of whole communities within a targeted group) is revolutionizing the field of …

Euglenozoa: taxonomy, diversity and ecology, symbioses and viruses

AY Kostygov, A Karnkowska, J Votýpka… - Open …, 2021 - royalsocietypublishing.org
Euglenozoa is a species-rich group of protists, which have extremely diverse lifestyles and a
range of features that distinguish them from other eukaryotes. They are composed of free …

Parasites dominate hyperdiverse soil protist communities in Neotropical rainforests

F Mahé, C de Vargas, D Bass, L Czech… - Nature ecology & …, 2017 - nature.com
High animal and plant richness in tropical rainforest communities has long intrigued
naturalists. It is unknown if similar hyperdiversity patterns are reflected at the microbial scale …

Diversity and temporal patterns of planktonic protist assemblages at a Mediterranean Long Term Ecological Research site

R Piredda, MP Tomasino, AM D'erchia… - FEMS microbiology …, 2017 - academic.oup.com
We tracked temporal changes in protist diversity at the Long Term Ecological Research
(LTER) station MareChiara in the Gulf of Naples (Mediterranean Sea) on eight dates in 2011 …

Chlamydiae in the environment

A Collingro, S Köstlbacher, M Horn - Trends in Microbiology, 2020 - cell.com
Chlamydiae have been known for more than a century as major pathogens of humans. Yet
they are also found ubiquitously in the environment where they thrive within protists and in …

Phytoplankton community and HAB species in the South China Sea detected by morphological and metabarcoding approaches

Z Wang, L Liu, Y Tang, A Li, C Liu, C **e, L **ao, S Lu - Harmful Algae, 2022 - Elsevier
The southern Chinese coast is one of the most developed regions in China and is an area
where harmful algal blooms (HABs) have occurred frequently. In this study, differences in the …

Patterns and processes in marine microeukaryotic community biogeography from **amen coastal waters and intertidal sediments, southeast China

W Chen, Y Pan, L Yu, J Yang, W Zhang - Frontiers in microbiology, 2017 - frontiersin.org
Microeukaryotes play key roles in the structure and functioning of marine ecosystems. Little
is known about the relative importance of the processes that drive planktonic and benthic …

Sediment archives reveal irreversible shifts in plankton communities after World War II and agricultural pollution

R Siano, M Lassudrie, P Cuzin, N Briant, V Loizeau… - Current Biology, 2021 - cell.com
To evaluate the stability and resilience 1 of coastal ecosystem communities to perturbations
that occurred during the Anthropocene, 2 pre-industrial biodiversity baselines inferred from …

Time series and beyond: multifaceted plankton research at a marine Mediterranean LTER site

A Zingone, D D'Alelio, MG Mazzocchi… - Nature …, 2019 - ricerca.ogs.it
Plankton are a pivotal component of the diversity and functioning of coastal marine
ecosystems. A long time-series of observations is the best tool to trace their patterns and …

High and specific diversity of protists in the deep-sea basins dominated by diplonemids, kinetoplastids, ciliates and foraminiferans

A Schoenle, M Hohlfeld, K Hermanns, F Mahé… - Communications …, 2021 - nature.com
Heterotrophic protists (unicellular eukaryotes) form a major link from bacteria and algae to
higher trophic levels in the sunlit ocean. Their role on the deep seafloor, however, is only …