Video object segmentation and tracking: A survey

R Yao, G Lin, S ** arthropod limb
C Wolff, JY Tinevez, T Pietzsch, E Stamataki, B Harich… - Elife, 2018 - elifesciences.org
During development, coordinated cell behaviors orchestrate tissue and organ
morphogenesis. Detailed descriptions of cell lineages and behaviors provide a powerful …

Automated deep lineage tree analysis using a Bayesian single cell tracking approach

K Ulicna, G Vallardi, G Charras… - Frontiers in Computer …, 2021 - frontiersin.org
Single-cell methods are beginning to reveal the intrinsic heterogeneity in cell populations,
arising from the interplay of deterministic and stochastic processes. However, it remains …

Microscopy cell segmentation via convolutional LSTM networks

A Arbelle, TR Raviv - 2019 IEEE 16th International Symposium …, 2019 - ieeexplore.ieee.org
Live cell microscopy sequences exhibit complex spatial structures and complicated temporal
behaviour, making their analysis a challenging task. Considering cell segmentation …

Efficient processing and analysis of large-scale light-sheet microscopy data

F Amat, B Höckendorf, Y Wan, WC Lemon, K McDole… - Nature protocols, 2015 - nature.com
Light-sheet microscopy is a powerful method for imaging the development and function of
complex biological systems at high spatiotemporal resolution and over long time scales …

EmbedTrack—Simultaneous cell segmentation and tracking through learning offsets and clustering bandwidths

K Löffler, R Mikut - IEEE Access, 2022 - ieeexplore.ieee.org
To shed light on the processes driving cell migration, a systematic analysis of the cell
behavior is required. Since the manual analysis of hundreds or even thousands of cells is …

Graph neural network for cell tracking in microscopy videos

T Ben-Haim, TR Raviv - European Conference on Computer Vision, 2022 - Springer
We present a novel graph neural network (GNN) approach for cell tracking in high-
throughput microscopy videos. By modeling the entire time-lapse sequence as a direct …

Cell segmentation proposal network for microscopy image analysis

SU Akram, J Kannala, L Eklund, J Heikkilä - International Workshop on …, 2016 - Springer
Accurate cell segmentation is vital for the development of reliable microscopy image
analysis methods. It is a very challenging problem due to low contrast, weak boundaries …