Selection signatures in livestock genome: A review of concepts, approaches and applications

KA Saravanan, M Panigrahi, H Kumar, B Bhushan… - Livestock Science, 2020 - Elsevier
Livestock populations have been consistently improving in terms of performance and
productivity by selective breeding over the centuries. These selection strategies are …

Native pig breeds as a source of biodiversity—Breeding and economic aspects

A Kasprzyk, A Walenia - Agriculture, 2023 - mdpi.com
The purpose of this paper is to summarize the available important information on local pig
breeds maintained in Europe. Genetic erosion has prompted national and international …

Whole-genome sequencing of European autochthonous and commercial pig breeds allows the detection of signatures of selection for adaptation of genetic resources …

S Bovo, A Ribani, M Muñoz, E Alves, JP Araujo… - Genetics Selection …, 2020 - Springer
Background Natural and artificial directional selection in cosmopolitan and autochthonous
pig breeds and wild boars have shaped their genomes and resulted in a reservoir of animal …

Admixture and breed traceability in European indigenous pig breeds and wild boar using genome-wide SNP data

C Dadousis, M Muñoz, C Óvilo, MC Fabbri, JP Araújo… - Scientific reports, 2022 - nature.com
Preserving diversity of indigenous pig (Sus scrofa) breeds is a key factor to (i) sustain the
pork chain (both at local and global scales) including the production of high-quality branded …

Genome-wide association study reveals additive and non-additive effects on growth traits in Duroc pigs

Y Xue, S Liu, W Li, R Mao, Y Zhuo, W **ng, J Liu… - Genes, 2022 - mdpi.com
Growth rate plays a critical role in the pig industry and is related to quantitative traits
controlled by many genes. Here, we aimed to identify causative mutations and candidate …

Genetic Differentiation among Livestock Breeds—Values for Fst

SJG Hall - Animals, 2022 - mdpi.com
Simple Summary The degree of relationship among livestock breeds can be quantified by
the Fst statistic, which measures the extent of genetic differentiation between them. An Fst …

Multiple selection signatures in farmed atlantic salmon adapted to different environments across hemispheres

ME López, T Linderoth, A Norris, JP Lhorente… - Frontiers in …, 2019 - frontiersin.org
Domestication of Atlantic salmon started approximately 40 years ago, using artificial
selection through genetic improvement programs. Selection is likely to have imposed …

Powerful detection of polygenic selection and evidence of environmental adaptation in US beef cattle

TN Rowan, HJ Durbin, CM Seabury, RD Schnabel… - PLoS …, 2021 - journals.plos.org
Selection on complex traits can rapidly drive evolution, especially in stressful environments.
This polygenic selection does not leave intense sweep signatures on the genome, rather …

Discovery of genomic characteristics and selection signatures in southern Chinese local cattle

Y Liu, L Xu, L Yang, G Zhao, J Li, D Liu, Y Li - Frontiers in Genetics, 2020 - frontiersin.org
Chinese local cattle with a high level of genetic diversity mainly originate from two
subspecies; the cattle in northern China are primarily Bos Taurus, and the cattle in southern …

Detection of runs of homozygosity in conserved and commercial pig breeds in Poland

T Szmatoła, I Jasielczuk… - Journal of Animal …, 2020 - Wiley Online Library
Runs of homozygosity (ROH) are continuous segments of the genome that arose as a result
of inbreeding, resulting in the inheritance of identical haplotypes from both parents who …