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[HTML][HTML] One year into the pandemic: Short-term evolution of SARS-CoV-2 and emergence of new lineages
The COVID-19 pandemic was officially declared on March 11 th, 2020. Since the very
beginning, the spread of the virus has been tracked nearly in real-time by worldwide …
beginning, the spread of the virus has been tracked nearly in real-time by worldwide …
Evolution and epidemic spread of SARS-CoV-2 in Brazil
Brazil currently has one of the fastest-growing severe acute respiratory syndrome
coronavirus 2 (SARS-CoV-2) epidemics in the world. Because of limited available data …
coronavirus 2 (SARS-CoV-2) epidemics in the world. Because of limited available data …
Genomic characterization of a novel SARS-CoV-2 lineage from Rio de Janeiro, Brazil
CM Voloch, R da Silva Francisco Jr… - Journal of …, 2021 - journals.asm.org
Almost simultaneously, several studies reported the emergence of novel severe acute
respiratory syndrome coronavirus 2 (SARS-CoV-2) lineages characterized by distinct …
respiratory syndrome coronavirus 2 (SARS-CoV-2) lineages characterized by distinct …
Temporal signal and the phylodynamic threshold of SARS-CoV-2
The ongoing SARS-CoV-2 outbreak marks the first time that large amounts of genome
sequence data have been generated and made publicly available in near real time. Early …
sequence data have been generated and made publicly available in near real time. Early …
Ultrafast Sample placement on Existing tRees (UShER) enables real-time phylogenetics for the SARS-CoV-2 pandemic
As the SARS-CoV-2 virus spreads through human populations, the unprecedented
accumulation of viral genome sequences is ushering in a new era of 'genomic contact …
accumulation of viral genome sequences is ushering in a new era of 'genomic contact …
Spatiotemporal invasion dynamics of SARS-CoV-2 lineage B. 1.1. 7 emergence
Understanding the causes and consequences of the emergence of severe acute respiratory
syndrome coronavirus 2 (SARS-CoV-2) variants of concern is crucial to pandemic control yet …
syndrome coronavirus 2 (SARS-CoV-2) variants of concern is crucial to pandemic control yet …
Untangling introductions and persistence in COVID-19 resurgence in Europe
After the first wave of SARS-CoV-2 infections in spring 2020, Europe experienced a
resurgence of the virus starting in late summer 2020 that was deadlier and more difficult to …
resurgence of the virus starting in late summer 2020 that was deadlier and more difficult to …
A recurrent mutation at position 26340 of SARS-CoV-2 is associated with failure of the E gene quantitative reverse transcription-PCR utilized in a commercial dual …
M Artesi, S Bontems, P Göbbels… - Journal of clinical …, 2020 - journals.asm.org
Control of the ongoing severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)
pandemic requires accurate laboratory testing to identify infected individuals while also …
pandemic requires accurate laboratory testing to identify infected individuals while also …
The emergence of SARS-CoV-2 variants of concern is driven by acceleration of the substitution rate
The ongoing SARS-CoV-2 pandemic has seen an unprecedented amount of rapidly
generated genome data. These data have revealed the emergence of lineages with …
generated genome data. These data have revealed the emergence of lineages with …
[HTML][HTML] Early introductions and transmission of SARS-CoV-2 variant B. 1.1. 7 in the United States
The emergence and spread of SARS-CoV-2 lineage B. 1.1. 7, first detected in the United
Kingdom, has become a global public health concern because of its increased …
Kingdom, has become a global public health concern because of its increased …