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[HTML][HTML] Empowering biomedical discovery with AI agents
We envision" AI scientists" as systems capable of skeptical learning and reasoning that
empower biomedical research through collaborative agents that integrate AI models and …
empower biomedical research through collaborative agents that integrate AI models and …
Molecular quantitative trait loci
Understanding functional effects of genetic variants is one of the key challenges in human
genetics, as much of disease-associated variation is located in non-coding regions with …
genetics, as much of disease-associated variation is located in non-coding regions with …
MetaboAnalyst 6.0: towards a unified platform for metabolomics data processing, analysis and interpretation
We introduce MetaboAnalyst version 6.0 as a unified platform for processing, analyzing, and
interpreting data from targeted as well as untargeted metabolomics studies using liquid …
interpreting data from targeted as well as untargeted metabolomics studies using liquid …
Tutorial: a guide to performing polygenic risk score analyses
A polygenic score (PGS) or polygenic risk score (PRS) is an estimate of an individual's
genetic liability to a trait or disease, calculated according to their genotype profile and …
genetic liability to a trait or disease, calculated according to their genotype profile and …
Calculating polygenic risk scores (PRS) in UK Biobank: a practical guide for epidemiologists
A polygenic risk score estimates the genetic risk of an individual for some disease or trait,
calculated by aggregating the effect of many common variants associated with the condition …
calculated by aggregating the effect of many common variants associated with the condition …
Analysis of somatic mutations in whole blood from 200,618 individuals identifies pervasive positive selection and novel drivers of clonal hematopoiesis
Human aging is marked by the emergence of a tapestry of clonal expansions in dividing
tissues, particularly evident in blood as clonal hematopoiesis (CH). CH, linked to cancer risk …
tissues, particularly evident in blood as clonal hematopoiesis (CH). CH, linked to cancer risk …
A genetically informed Registered Report on adverse childhood experiences and mental health
Children who experience adversities have an elevated risk of mental health problems.
However, the extent to which adverse childhood experiences (ACEs) cause mental health …
However, the extent to which adverse childhood experiences (ACEs) cause mental health …
A cause–effect relationship between Graves' disease and the gut microbiome contributes to the thyroid–gut axis: a bidirectional two-sample Mendelian randomization …
J Cao, N Wang, Y Luo, C Ma, Z Chen… - Frontiers in …, 2023 - frontiersin.org
Background An association between Graves' disease (GD) and the gut microbiome has
been identified, but the causal effect between them remains unclear. Methods Bidirectional …
been identified, but the causal effect between them remains unclear. Methods Bidirectional …
Interpreting omics data with pathway enrichment analysis
Pathway enrichment analysis is indispensable for interpreting omics datasets and
generating hypotheses. However, the foundations of enrichment analysis remain elusive to …
generating hypotheses. However, the foundations of enrichment analysis remain elusive to …
eXclusionarY: 10 years later, where are the sex chromosomes in GWASs?
Summary 10 years ago, a detailed analysis showed that only 33% of genome-wide
association study (GWAS) results included the X chromosome. Multiple recommendations …
association study (GWAS) results included the X chromosome. Multiple recommendations …