Forensic implications of PCR inhibition—a review

R Alaeddini - Forensic Science International: Genetics, 2012 - Elsevier
Polymerase chain reaction (PCR) is currently the method of choice for the identification of
human remains in forensic coursework. DNA samples from crime scenes often contain co …

Molecular techniques in wastewater: understanding microbial communities, detecting pathogens, and real-time process control

KA Gilbride, DY Lee, LA Beaudette - Journal of microbiological methods, 2006 - Elsevier
Traditionally, the detection of pathogens in water, wastewater, and other environmental
samples is restricted by the ability to culture such organisms from complex environmental …

Deterministic processes vary during community assembly for ecologically dissimilar taxa

JR Powell, S Karunaratne, CD Campbell, H Yao… - Nature …, 2015 - nature.com
The continuum hypothesis states that both deterministic and stochastic processes contribute
to the assembly of ecological communities. However, the contextual dependency of these …

Characterization of hydrocarbon-degrading microbial populations in contaminated and pristine alpine soils

R Margesin, D Labbe, F Schinner… - Applied and …, 2003 - journals.asm.org
Biodegradation of petroleum hydrocarbons in cold environments, including Alpine soils, is a
result of indigenous cold-adapted microorganisms able to degrade these contaminants. In …

Identification of nonpoint sources of fecal pollution in coastal waters by using host-specific 16S ribosomal DNA genetic markers from fecal anaerobes

AE Bernhard, KG Field - Applied and environmental microbiology, 2000 - journals.asm.org
We describe a new PCR-based method for distinguishing human and cow fecal
contamination in coastal waters without culturing indicator organisms, and we show that the …

Selection of specific endophytic bacterial genotypes by plants in response to soil contamination

SD Siciliano, N Fortin, A Mihoc, G Wisse… - Applied and …, 2001 - journals.asm.org
Plant-bacterial combinations can increase contaminant degradation in the rhizosphere, but
the role played by indigenous root-associated bacteria during plant growth in contaminated …

Biodegradation of petroleum hydrocarbons by psychrotrophic Pseudomonas strains possessing both alkane (alk) and naphthalene (nah) catabolic pathways

LG Whyte, L Bourbonniere… - Applied and environmental …, 1997 - journals.asm.org
Three hydrocarbon-degrading psychrotrophic bacteria were isolated from petroleum-
contaminated Arctic soils and characterized. Two of the strains, identified as Pseudomonas …

Changes in microbial community composition and function during a polyaromatic hydrocarbon phytoremediation field trial

SD Siciliano, JJ Germida, K Banks… - Applied and …, 2003 - journals.asm.org
The purpose of this study was to investigate the mechanism by which phytoremediation
systems promote hydrocarbon degradation in soil. The composition and degradation …

Characterization of the microbial diversity in a permafrost sample from the Canadian high Arctic using culture-dependent and culture-independent methods

B Steven, G Briggs, CP McKay… - FEMS microbiology …, 2007 - academic.oup.com
A combination of culture-dependent and culture-independent methodologies (Bacteria and
Archaea 16S rRNA gene clone library analyses) was used to determine the microbial …

Evaluation of PCR Amplification Bias by Terminal Restriction Fragment Length Polymorphism Analysis of Small-Subunit rRNA and mcrA Genes by Using Defined …

T Lueders, MW Friedrich - Applied and environmental …, 2003 - journals.asm.org
Terminal restriction fragment length polymorphism (T-RFLP) analysis is a widely used
method for profiling microbial community structure in different habitats by targeting small …