The shikimate pathway—a metabolic tree with many branche

R Bentley, E Haslam - Critical reviews in biochemistry and …, 1990 - Taylor & Francis
The aromatic amino acids, phenylalanine, tyrosine, and tryptophan, are formed by a reaction
sequence leading from the two carbohydrate precursors, D-erythrose 4-phosphate and …

Linkage map of Escherichia coli K-8

BJ Bachmann - Microbiological reviews, 1990 - journals.asm.org
The linkage map of Escherichia coli K-12 depicts the arrangement of genes on the circular
chromosome of this organism. The basic units of the map are minutes, determined by the …

The gut microbiome in social anxiety disorder: evidence of altered composition and function

MI Butler, TFS Bastiaanssen, C Long-Smith… - Translational …, 2023 - nature.com
The microbiome-gut-brain axis plays a role in anxiety, the stress response and social
development, and is of growing interest in neuropsychiatric conditions. The gut microbiota …

Proteinortho: Detection of (Co-)orthologs in large-scale analysis

M Lechner, S Findeiß, L Steiner, M Marz, PF Stadler… - BMC …, 2011 - Springer
Background Orthology analysis is an important part of data analysis in many areas of
bioinformatics such as comparative genomics and molecular phylogenetics. The ever …

Aminotransferases: demonstration of homology and division into evolutionary subgroups

PK Mehta, TI Hale, P Christen - European Journal of …, 1993 - Wiley Online Library
A total of 150 amino acid sequences of vitamin B6‐dependent enzymes are known to date,
the largest contingent being furnished by the aminotransferases with 51 sequences of 14 …

Novel biosynthetic approaches to the production of unnatural amino acids using transaminases

PP Taylor, DP Pantaleone, RF Senkpeil… - Trends in …, 1998 - cell.com
Transaminase enzymes are being increasingly applied to the large-scale synthesis of
unnatural and nonproteinogenic amino acids. Typically displaying relaxed substrate …

Compilation of E.coli mRNA promoter sequences

S Lisser, H Margalit - Nucleic acids research, 1993 - academic.oup.com
An updated compilation of 300 E. coli mRNA promoter sequences is presented. For each
sequence the most recent relevant paper was checked, to verify the location of the …

Biosynthesis of the aromatic amino acids

J Pittard, J Yang - EcoSal Plus, 2008 - journals.asm.org
This chapter describes in detail the genes and proteins of Escherichia coli involved in the
biosynthesis and transport of the three aromatic amino acids tyrosine, phenylalanine, and …

Linkage Map of Escherichia coli K-12, Edition 10: The Traditional Map

MKB Berlyn - Microbiology and Molecular Biology Reviews, 1998 - journals.asm.org
This map is an update of the edition 9 map by Berlyn et al.(MKB Berlyn, KB Low, and KE
Rudd, p. 1715–1902, in FC Neidhardt et al., ed., Escherichia coli and Salmonella: cellular …

Model-driven discovery of underground metabolic functions in Escherichia coli

GI Guzmán, J Utrilla, S Nurk, E Brunk, JM Monk… - Proceedings of the …, 2015 - pnas.org
Enzyme promiscuity toward substrates has been discussed in evolutionary terms as
providing the flexibility to adapt to novel environments. In the present work, we describe an …