Trans-Acting Small RNAs and Their Effects on Gene Expression in Escherichia coli and Salmonella enterica

J Hör, G Matera, J Vogel, S Gottesman, G Storz - EcoSal Plus, 2020 - Am Soc Microbiol
The last few decades have led to an explosion in our understanding of the major roles that
small regulatory RNAs (sRNAs) play in regulatory circuits and the responses to stress in …

RNA-binding proteins in bacteria

E Holmqvist, J Vogel - Nature Reviews Microbiology, 2018 - nature.com
RNA-binding proteins (RBPs) are central to most if not all cellular processes, dictating the
fate of virtually all RNA molecules in the cell. Starting with pioneering work on ribosomal …

Diversity, versatility and complexity of bacterial gene regulation mechanisms: opportunities and drawbacks for applications in synthetic biology

I Bervoets, D Charlier - FEMS microbiology reviews, 2019 - academic.oup.com
Gene expression occurs in two essential steps: transcription and translation. In bacteria, the
two processes are tightly coupled in time and space, and highly regulated. Tight regulation …

High-throughput map** of the phage resistance landscape in E. coli

VK Mutalik, BA Adler, HS Rishi, D Piya, C Zhong… - PLoS …, 2020 - journals.plos.org
Bacteriophages (phages) are critical players in the dynamics and function of microbial
communities and drive processes as diverse as global biogeochemical cycles and human …

Hfq chaperone brings speed dating to bacterial sRNA

A Santiago‐Frangos… - Wiley Interdisciplinary …, 2018 - Wiley Online Library
Hfq is a ubiquitous, Sm‐like RNA binding protein found in most bacteria and some archaea.
Hfq binds small regulatory RNAs (sRNAs), facilitates base pairing between sRNAs and their …

Global regulation by CsrA and its RNA antagonists

T Romeo, P Babitzke - Microbiology spectrum, 2018 - Am Soc Microbiol
The sequence-specific RNA binding protein CsrA is employed by diverse bacteria in the
posttranscriptional regulation of gene expression. Its binding interactions with RNA have …

sRNA-mediated control in bacteria: An increasing diversity of regulatory mechanisms

MG Jørgensen, JS Pettersen, BH Kallipolitis - Biochimica et Biophysica …, 2020 - Elsevier
Small regulatory RNAs (sRNAs) act as post-transcriptional regulators controlling bacterial
adaptation to environmental changes. Our current understanding of the mechanisms …

Coupled transcription-translation in prokaryotes: an old couple with new surprises

M Irastortza-Olaziregi, O Amster-Choder - Frontiers in Microbiology, 2021 - frontiersin.org
Coupled transcription-translation (CTT) is a hallmark of prokaryotic gene expression. CTT
occurs when ribosomes associate with and initiate translation of mRNAs whose transcription …

Global maps of ProQ binding in vivo reveal target recognition via RNA structure and stability control at mRNA 3′ ends

E Holmqvist, L Li, T Bischler, L Barquist, J Vogel - Molecular cell, 2018 - cell.com
The conserved RNA-binding protein ProQ has emerged as the centerpiece of a previously
unknown third large network of post-transcriptional control in enterobacteria. Here, we have …

Highly fluorescent N, F co-doped carbon dots with tunable light emission for multicolor bio-labeling and antibacterial applications

J Hua, P Hua, K Qin - Journal of Hazardous Materials, 2023 - Elsevier
Carbon dots (CDs) have emerged as potential biomaterials for bioimaging and antimicrobial
applications. However, the lack of tunable long-wavelength emission performance and …