Fishing for fish environmental DNA: Ecological applications, methodological considerations, surveying designs, and ways forward
Vast global declines of freshwater and marine fish diversity and population abundance pose
serious threats to both ecosystem sustainability and human livelihoods. Environmental DNA …
serious threats to both ecosystem sustainability and human livelihoods. Environmental DNA …
[HTML][HTML] Methodology for fish biodiversity monitoring with environmental DNA metabarcoding: The primers, databases and bioinformatic pipelines
Environmental DNA (eDNA) originates from cellular material shed by organisms into aquatic
or terrestrial environments and can be sampled and monitored using metabarcoding …
or terrestrial environments and can be sampled and monitored using metabarcoding …
[HTML][HTML] Environmental DNA for biomonitoring
The second series of papers concerns the use of eDNA to monitor fish diversity. We focus on
fish because they are among the most important groups of bioindicators and also because …
fish because they are among the most important groups of bioindicators and also because …
Small changes make big progress: A more efficient eDNA monitoring method for freshwater fish
J Yang, L Zhang, Y Mu, X Zhang - Environmental DNA, 2023 - Wiley Online Library
Comprehensive and accurate assessments of fish composition and diversity are essential
for understanding fish ecology and resource management. Traditional fish surveys generally …
for understanding fish ecology and resource management. Traditional fish surveys generally …
Combining sampling gear to optimally inventory species highlights the efficiency of eDNA metabarcoding
Biodiversity surveys may require the use of multiple types of sampling gear to maximize the
efficiency of species detections, yet few studies have investigated how to optimally distribute …
efficiency of species detections, yet few studies have investigated how to optimally distribute …
The effect of activity, energy use, and species identity on environmental DNA shedding of freshwater fish
B Thalinger, A Rieder, A Teuffenbach, Y Pütz… - Frontiers in Ecology …, 2021 - frontiersin.org
The quantitative measurement of environmental DNA (eDNA) from field-collected water
samples is gaining importance for the monitoring of fish communities and populations. The …
samples is gaining importance for the monitoring of fish communities and populations. The …
eDNA metabarcoding reveals differences in fish diversity and community structure in Danjiang River
J Deng, X Zhang, X Yao, J Rao, F Dai, H Wang… - Scientific Reports, 2024 - nature.com
Fish diversity, an important indicator of aquatic ecosystem health, is declining due to water
pollution, overfishing, climate change, and invasive species. Effective surveying and …
pollution, overfishing, climate change, and invasive species. Effective surveying and …
Navigating the trade‐offs between environmental DNA and conventional field surveys for improved amphibian monitoring
The need for efficient, accurate biodiversity monitoring is growing, especially for globally
imperiled taxa, such as amphibians. Environmental DNA (eDNA) analysis holds enormous …
imperiled taxa, such as amphibians. Environmental DNA (eDNA) analysis holds enormous …
Using hierarchical models to compare the sensitivity of metabarcoding and qPCR for eDNA detection
Environmental DNA (eDNA) sampling—the detection of intra-or extra-cellular DNA in
environmental samples—is a rapid and sensitive survey method for detecting aquatic …
environmental samples—is a rapid and sensitive survey method for detecting aquatic …
Coastal rocky reef fish monitoring in the context of the Marine Strategy Framework Directive: Environmental DNA metabarcoding complements underwater visual …
Efficient biodiversity monitoring programs are essential to assess the ecological status of
marine ecosystems. In the context of the European Marine Strategy Framework Directive …
marine ecosystems. In the context of the European Marine Strategy Framework Directive …