Nitrogen assimilation in Escherichia coli: putting molecular data into a systems perspective

WC van Heeswijk, HV Westerhoff… - … and Molecular Biology …, 2013 - Am Soc Microbiol
We present a comprehensive overview of the hierarchical network of intracellular processes
revolving around central nitrogen metabolism in Escherichia coli. The hierarchy intertwines …

Regulation and control of metabolic fluxes in microbes

L Gerosa, U Sauer - Current opinion in biotechnology, 2011 - Elsevier
After about ten years of research renaissance in metabolism, the present challenge is to
understand how metabolic fluxes are controlled by a complex interplay of overlap** …

Macromolecular networks and intelligence in microorganisms

HV Westerhoff, AN Brooks, E Simeonidis… - Frontiers in …, 2014 - frontiersin.org
Living organisms persist by virtue of complex interactions among many components
organized into dynamic, environment-responsive networks that span multiple scales and …

The virtual liver: a multidisciplinary, multilevel challenge for systems biology

HG Holzhütter, D Drasdo, T Preusser… - … Systems Biology and …, 2012 - Wiley Online Library
The liver is the central metabolic organ in human physiology, with functions that are
fundamentally important to the detoxification of xenobiotics (drugs), the maintenance of …

[HTML][HTML] Regulation of respiration in muscle cells in vivo by VDAC through interaction with the cytoskeleton and MtCK within Mitochondrial Interactosome

R Guzun, M Gonzalez-Granillo… - … et Biophysica Acta (BBA …, 2012 - Elsevier
This review describes the recent experimental data on the importance of the VDAC–
cytoskeleton interactions in determining the mechanisms of energy and metabolite transfer …

Synthetic biology and regulatory networks: where metabolic systems biology meets control engineering

F He, E Murabito, HV Westerhoff - Journal of The Royal …, 2016 - royalsocietypublishing.org
Metabolic pathways can be engineered to maximize the synthesis of various products of
interest. With the advent of computational systems biology, this endeavour is usually carried …

[HTML][HTML] Systems biology: the elements and principles of life

HV Westerhoff, C Winder, H Messiha, E Simeonidis… - FEBS letters, 2009 - Elsevier
Systems Biology has a mission that puts it at odds with traditional paradigms of physics and
molecular biology, such as the simplicity requested by Occam's razor and minimum …

Gold-Modified Molecularly Imprinted N-Methacryloyl-(l)-phenylalanine-containing Electrodes for Electrochemical Detection of Dopamine

N Abu Shama, S Aşır, M Ozsoz, I Göktürk, D Türkmen… - Bioengineering, 2022 - mdpi.com
A molecularly imprinted polymer-based pencil graphite electrode (MIP PGE) sensor,
modified with gold nanoparticles, was utilized for the detection of dopamine in the presence …

[HTML][HTML] Mitochondria–cytoskeleton interaction: distribution of β-tubulins in cardiomyocytes and HL-1 cells

R Guzun, M Karu-Varikmaa… - … Et Biophysica Acta (BBA …, 2011 - Elsevier
Mitochondria–cytoskeleton interactions were analyzed in adult rat cardiomyocytes and in
cancerous non-beating HL-1 cells of cardiac phenotype. We show that in adult …

Metabolic control analysis indicates a change of strategy in the treatment of cancer

R Moreno-Sánchez, E Saavedra… - Mitochondrion, 2010 - Elsevier
Much of the search for the “magic cancer bullet” or “block buster” has followed the
expectation of a single gene or protein as “the rate-limiting step” for tumor persistence …