The Syntrophy hypothesis for the origin of eukaryotes revisited

P López-García, D Moreira - Nature microbiology, 2020 - nature.com
The discovery of Asgard archaea, phylogenetically closer to eukaryotes than other archaea,
together with improved knowledge of microbial ecology, impose new constraints on …

Organellar introns in fungi, algae, and plants

J Mukhopadhyay, G Hausner - Cells, 2021 - mdpi.com
Introns are ubiquitous in eukaryotic genomes and have long been considered as 'junk
RNA'but the huge energy expenditure in their transcription, removal, and degradation …

Mosaic origin of the eukaryotic kinetochore

EC Tromer, JJE van Hooff… - Proceedings of the …, 2019 - National Acad Sciences
The emergence of eukaryotes from ancient prokaryotic lineages embodied a remarkable
increase in cellular complexity. While prokaryotes operate simple systems to connect DNA to …

Integrating phylogenetics with intron positions illuminates the origin of the complex spliceosome

J Vosseberg, D Stolker… - … Biology and Evolution, 2023 - academic.oup.com
Eukaryotic genes are characterized by the presence of introns that are removed from pre-
mRNA by a spliceosome. This ribonucleoprotein complex is comprised of multiple RNA …

RNA-targeting splicing modifiers: drug development and screening assays

Z Tang, J Zhao, ZJ Pearson, ZV Boskovic, J Wang - Molecules, 2021 - mdpi.com
RNA splicing is an essential step in producing mature messenger RNA (mRNA) and other
RNA species. Harnessing RNA splicing modifiers as a new pharmacological modality is …

Bacterial genes outnumber archaeal genes in eukaryotic genomes

J Brueckner, WF Martin - Genome biology and evolution, 2020 - academic.oup.com
Eukaryotes are typically depicted as descendants of archaea, but their genomes are
evolutionary chimeras with genes stemming from archaea and bacteria. Which prokaryotic …

Insights into the role of alternative splicing in plant temperature response

V Dikaya, N El Arbi, N Rojas-Murcia… - Journal of …, 2021 - academic.oup.com
Alternative splicing occurs in all eukaryotic organisms. Since the first description of
multiexon genes and the splicing machinery, the field has expanded rapidly, especially in …

Taxonomy of introns and the evolution of minor introns

AM Olthof, CF Schwoerer, KN Girardini… - Nucleic Acids …, 2024 - academic.oup.com
Classification of introns, which is crucial to understanding their evolution and splicing, has
historically been binary and has resulted in the naming of major and minor introns that are …

Expansion and functional analysis of the SR-related protein family across the domains of life

SM Cascarina, ED Ross - Rna, 2022 - rnajournal.cshlp.org
Serine/arginine-rich (SR) proteins comprise a family of proteins that is predominantly found
in eukaryotes and plays a prominent role in RNA splicing. A characteristic feature of SR …

Introns: the “dark matter” of the eukaryotic genome

KN Girardini, AM Olthof, RN Kanadia - Frontiers in Genetics, 2023 - frontiersin.org
The emergence of introns was a significant evolutionary leap that is a major distinguishing
feature between prokaryotic and eukaryotic genomes. While historically introns were …