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Soil viral diversity, ecology and climate change
Soil viruses are highly abundant and have important roles in the regulation of host dynamics
and soil ecology. Climate change is resulting in unprecedented changes to soil ecosystems …
and soil ecology. Climate change is resulting in unprecedented changes to soil ecosystems …
Interactions between bacterial and phage communities in natural environments
We commonly acknowledge that bacterial viruses (phages) shape the composition and
evolution of bacterial communities in nature and therefore have important roles in ecosystem …
evolution of bacterial communities in nature and therefore have important roles in ecosystem …
Centenarians have a diverse gut virome with the potential to modulate metabolism and promote healthy lifespan
J Johansen, K Atarashi, Y Arai, N Hirose… - Nature …, 2023 - nature.com
Distinct gut microbiome ecology may be implicated in the prevention of aging-related
diseases as it influences systemic immune function and resistance to infections. Yet, the viral …
diseases as it influences systemic immune function and resistance to infections. Yet, the viral …
Interrogating the viral dark matter of the rumen ecosystem with a global virome database
The diverse rumen virome can modulate the rumen microbiome, but it remains largely
unexplored. Here, we mine 975 published rumen metagenomes for viral sequences, create …
unexplored. Here, we mine 975 published rumen metagenomes for viral sequences, create …
Adaptive strategies and ecological roles of phages in habitats under physicochemical stress
Bacteriophages (phages) play a vital role in ecosystem functions by influencing the
composition, genetic exchange, metabolism, and environmental adaptation of microbial …
composition, genetic exchange, metabolism, and environmental adaptation of microbial …
Mesophilic and thermophilic viruses are associated with nutrient cycling during hyperthermophilic composting
H Liao, C Liu, C Ai, T Gao, QE Yang, Z Yu… - The ISME …, 2023 - academic.oup.com
While decomposition of organic matter by bacteria plays a major role in nutrient cycling in
terrestrial ecosystems, the significance of viruses remains poorly understood. Here we …
terrestrial ecosystems, the significance of viruses remains poorly understood. Here we …
Hidden diversity and potential ecological function of phosphorus acquisition genes in widespread terrestrial bacteriophages
JL Liang, S Feng, J Lu, X Wang, F Li, Y Guo… - Nature …, 2024 - nature.com
Phosphorus (P) limitation of ecosystem processes is widespread in terrestrial habitats. While
a few auxiliary metabolic genes (AMGs) in bacteriophages from aquatic habitats are …
a few auxiliary metabolic genes (AMGs) in bacteriophages from aquatic habitats are …
Diversity and potential host-interactions of viruses inhabiting deep-sea seamount sediments
M Yu, M Zhang, R Zeng, R Cheng, R Zhang… - Nature …, 2024 - nature.com
Seamounts are globally distributed across the oceans and form one of the major oceanic
biomes. Here, we utilized combined analyses of bulk metagenome and virome to study viral …
biomes. Here, we utilized combined analyses of bulk metagenome and virome to study viral …
[HTML][HTML] Ecological and functional roles of bacteriophages in contrasting environments: marine, terrestrial and human gut
Highlights•Phages are abundant within ecosystems, but their role is often understated.•
Ecological success models can help explain observed phage–bacteria …
Ecological success models can help explain observed phage–bacteria …
COBRA improves the completeness and contiguity of viral genomes assembled from metagenomes
Viruses are often studied using metagenome-assembled sequences, but genome
incompleteness hampers comprehensive and accurate analyses. Contig Overlap Based Re …
incompleteness hampers comprehensive and accurate analyses. Contig Overlap Based Re …