Survey for a Decade of Coding for DNA Storage

O Sabary, HM Kiah, PH Siegel… - IEEE Transactions on …, 2024 - ieeexplore.ieee.org
Advancements in DNA synthesis and sequencing technologies have enabled the storage of
data on synthetic DNA strands. However, realizing its potential relies on the design of …

Adaptive coding for DNA storage with high storage density and low coverage

B Cao, X Zhang, S Cui, Q Zhang - NPJ systems biology and …, 2022 - nature.com
The rapid development of information technology has generated substantial data, which
urgently requires new storage media and storage methods. DNA, as a storage medium with …

Encoding of non-biological information for its long-term storage in DNA

RR Garafutdinov, DA Chemeris, AR Sakhabutdinova… - Biosystems, 2022 - Elsevier
Abstract In 2019, at the World Economic Forum, DNA data storage was indicated as one of
the breakthroughs expected to radically impact the global socio-economic order. Indeed, dry …

Capacity-approaching constrained codes with error correction for DNA-based data storage

TT Nguyen, K Cai, KAS Immink… - IEEE Transactions on …, 2021 - ieeexplore.ieee.org
We propose coding techniques that simultaneously limit the length of homopolymers runs,
ensure the GC-content constraint, and are capable of correcting a single edit error in strands …

Construction of bio-constrained code for DNA data storage

Y Wang, M Noor-A-Rahim, E Gunawan… - IEEE …, 2019 - ieeexplore.ieee.org
With extremely high density and durable preservation, DNA data storage has become one of
the most cutting-edge techniques for long-term data storage. Similar to traditional storage …

Designing uncorrelated address constrain for DNA storage by DMVO algorithm

B Cao, X Ii, X Zhang, B Wang… - … /ACM transactions on …, 2020 - ieeexplore.ieee.org
At present, huge amounts of data are being produced every second, a situation that will
gradually overwhelm current storage technology. DNA is a storage medium that features …

Codes with run-length and GC-content constraints for DNA-based data storage

W Song, K Cai, M Zhang, C Yuen - IEEE Communications …, 2018 - ieeexplore.ieee.org
We propose a coding method to transform binary sequences into DNA base sequences
(codewords), namely sequences of the symbols A, T, C, and G, that satisfy the following two …

Design of constraint coding sets for archive DNA storage

Q Yin, Y Zheng, B Wang… - IEEE/ACM transactions on …, 2021 - ieeexplore.ieee.org
With the advent of the era of massive data, the increase of storage demand has far
exceeded current storage capacity. DNA molecules provide a reliable solution for big data …

Minimum free energy coding for DNA storage

B Cao, X Zhang, J Wu, B Wang… - IEEE Transactions on …, 2021 - ieeexplore.ieee.org
With the development of information technology, huge amounts of data are produced at the
same time. How to store data efficiently and at low cost has become an urgent problem. DNA …

Properties and constructions of constrained codes for DNA-based data storage

KAS Immink, K Cai - IEEE Access, 2020 - ieeexplore.ieee.org
We describe properties and constructions of constraint-based codes for DNA-based data
storage which account for the maximum repetition length and AT/GC balance. Generating …