Basic concepts of microarrays and potential applications in clinical microbiology

MB Miller, YW Tang - Clinical microbiology reviews, 2009 - journals.asm.org
The introduction of in vitro nucleic acid amplification techniques, led by real-time PCR, into
the clinical microbiology laboratory has transformed the laboratory detection of viruses and …

Aberrant DNA methylation impacts gene expression and prognosis in breast cancer subtypes

B Győrffy, G Bottai, T Fleischer… - … journal of cancer, 2016 - Wiley Online Library
DNA methylation has a substantial impact on gene expression, affecting the prognosis of
breast cancer (BC) patients dependent on molecular subtypes. In this study, we investigated …

Single cell transcriptomic landscape of diabetic foot ulcers

G Theocharidis, BE Thomas, D Sarkar… - Nature …, 2022 - nature.com
Diabetic foot ulceration (DFU) is a devastating complication of diabetes whose pathogenesis
remains incompletely understood. Here, we profile 174,962 single cells from the foot …

Hyperglycemia induces trained immunity in macrophages and their precursors and promotes atherosclerosis

L Edgar, N Akbar, AT Braithwaite, T Krausgruber… - Circulation, 2021 - ahajournals.org
Background: Cardiovascular risk in diabetes remains elevated despite glucose-lowering
therapies. We hypothesized that hyperglycemia induces trained immunity in macrophages …

Therapeutic B-cell depletion reverses progression of Alzheimer's disease

K Kim, X Wang, E Ragonnaud, M Bodogai… - Nature …, 2021 - nature.com
The function of B cells in Alzheimer's disease (AD) is not fully understood. While
immunoglobulins that target amyloid beta (Aβ) may interfere with plaque formation and …

YAP/TAZ-dependent reprogramming of colonic epithelium links ECM remodeling to tissue regeneration

S Yui, L Azzolin, M Maimets, MT Pedersen… - Cell stem cell, 2018 - cell.com
Tissue regeneration requires dynamic cellular adaptation to the wound environment. It is
currently unclear how this is orchestrated at the cellular level and how cell fate is affected by …

Imaging mass cytometry and multiplatform genomics define the phenogenomic landscape of breast cancer

HR Ali, HW Jackson, VRT Zanotelli, E Danenberg… - Nature Cancer, 2020 - nature.com
Genomic alterations shape cell phenotypes and the structure of tumor ecosystems in poorly
defined ways. To investigate these relationships, we used imaging mass cytometry to …

The gut microbiota plays a protective role in the host defence against pneumococcal pneumonia

TJ Schuijt, JM Lankelma, BP Scicluna, FS e Melo… - Gut, 2016 - gut.bmj.com
Objective Pneumonia accounts for more deaths than any other infectious disease
worldwide. The intestinal microbiota supports local mucosal immunity and is increasingly …

Macrophages in bone fracture healing: their essential role in endochondral ossification

C Schlundt, T El Khassawna, A Serra, A Dienelt… - Bone, 2018 - Elsevier
In fracture healing, skeletal and immune system are closely interacting through common cell
precursors and molecular mediators. It is thought that the initial inflammatory reaction, which …

Broad defects in the energy metabolism of leukocytes underlie immunoparalysis in sepsis

SC Cheng, BP Scicluna, RJW Arts, MS Gresnigt… - Nature …, 2016 - nature.com
The acute phase of sepsis is characterized by a strong inflammatory reaction. At later stages
in some patients, immunoparalysis may be encountered, which is associated with a poor …