Combining phylogenetics, phylodynamics and epidemiology will allow PANGEA to highlight
where prevention efforts should be focussed to reduce the HIV epidemic most effectively. To …

In the field of phylogenetics, BEAST2 is one of the most widely used software tools. It comes
with the graphical user interfaces BEAUti 2, DensiTree and Tracer, to create BEAST2 …

Phylogenetic clustering of HIV sequences from a random sample of patients can reveal
epidemiological transmission patterns, but interpretation is hampered by limited theoretical …

Role of Phylogenetics as a Tool to Predict the Spread of Resistance | The Journal of Infectious
Diseases | Oxford Academic Skip to Main Content Advertisement Oxford Academic Journals …

Background: More than 300 cities including the city of Amsterdam in the Netherlands have
joined the UNAIDS Fast-Track Cities initiative, committing to accelerate their HIV response …

Background Globally the access to HIV testing has greatly increased over the past 30 years.
Nonetheless, a high proportion of people living with HIV remains undiagnosed, even in …

Objective: MSM are at increased risk for infection with HIV-1 and hepatitis C virus (HCV). Is
HIV/HCV coinfection confined to specific HIV transmission networks? Design and methods …

Surveillance for HIV as a public health initiative requires timely, detailed and robust data to
systematically understand burden of infection, transmission patterns, direct prevention …

Motivation In the midst of an outbreak, identification of groups of individuals that represent
risk for transmission of the pathogen under investigation is critical to public health efforts …

Background In the last decade, universally available antiretroviral therapy (ART) has led to
greatly improved health and survival of people living with HIV in sub-Saharan Africa, and …