Generative models as an emerging paradigm in the chemical sciences
Traditional computational approaches to design chemical species are limited by the need to
compute properties for a vast number of candidates, eg, by discriminative modeling …
compute properties for a vast number of candidates, eg, by discriminative modeling …
[HTML][HTML] De novo molecular design and generative models
Molecular design strategies are integral to therapeutic progress in drug discovery.
Computational approaches for de novo molecular design have been developed over the …
Computational approaches for de novo molecular design have been developed over the …
Docking-based generative approaches in the search for new drug candidates
Highlights•Compound enumeration coupled with docking is rapidly gaining
popularity.•Docking-based generative models are reviewed.•New taxonomy for docking …
popularity.•Docking-based generative models are reviewed.•New taxonomy for docking …
Tartarus: A benchmarking platform for realistic and practical inverse molecular design
The efficient exploration of chemical space to design molecules with intended properties
enables the accelerated discovery of drugs, materials, and catalysts, and is one of the most …
enables the accelerated discovery of drugs, materials, and catalysts, and is one of the most …
Artificial intelligence and cheminformatics tools: a contribution to the drug development and chemical science
I Saifi, BA Bhat, SS Hamdani, UY Bhat… - Journal of …, 2024 - Taylor & Francis
In the ever-evolving field of drug discovery, the integration of Artificial Intelligence (AI) and
Machine Learning (ML) with cheminformatics has proven to be a powerful combination …
Machine Learning (ML) with cheminformatics has proven to be a powerful combination …
Parallel tempered genetic algorithm guided by deep neural networks for inverse molecular design
Inverse molecular design involves algorithms that sample molecules with specific target
properties from a multitude of candidates and can be posed as an optimization problem …
properties from a multitude of candidates and can be posed as an optimization problem …
Reconstruction of lossless molecular representations from fingerprints
The simplified molecular-input line-entry system (SMILES) is the most prevalent molecular
representation used in AI-based chemical applications. However, there are innate limitations …
representation used in AI-based chemical applications. However, there are innate limitations …
ChemistGA: a chemical synthesizable accessible molecular generation algorithm for real-world drug discovery
Many deep learning (DL)-based molecular generative models have been proposed to
design novel molecules. These models may perform well on benchmarks, but they usually …
design novel molecules. These models may perform well on benchmarks, but they usually …
JANUS: parallel tempered genetic algorithm guided by deep neural networks for inverse molecular design
Inverse molecular design, ie, designing molecules with specific target properties, can be
posed as an optimization problem. High-dimensional optimization tasks in the natural …
posed as an optimization problem. High-dimensional optimization tasks in the natural …
Local scaffold diversity-contributed generator for discovering potential NLRP3 inhibitors
W Bo, Y Duan, Y Zou, Z Ma, T Yang… - Journal of Chemical …, 2024 - ACS Publications
Deep generative models have become crucial tools in de novo drug design. In current
models for multiobjective optimization in molecular generation, the scaffold diversity is …
models for multiobjective optimization in molecular generation, the scaffold diversity is …