Accurately predicting enzyme functions through geometric graph learning on ESMFold-predicted structures

Y Song, Q Yuan, S Chen, Y Zeng, H Zhao… - Nature …, 2024 - nature.com
Enzymes are crucial in numerous biological processes, with the Enzyme Commission (EC)
number being a commonly used method for defining enzyme function. However, current EC …

[HTML][HTML] Advances in the application of protein language modeling for nucleic acid protein binding site prediction

B Wang, W Li - Genes, 2024 - mdpi.com
Protein and nucleic acid binding site prediction is a critical computational task that benefits a
wide range of biological processes. Previous studies have shown that feature selection …

AI-integrated network for RNA complex structure and dynamic prediction

H Liu, C Zhuo, J Gao, C Zeng, Y Zhao - Biophysics Reviews, 2024 - pubs.aip.org
RNA complexes are essential components in many cellular processes. The functions of
these complexes are linked to their tertiary structures, which are shaped by detailed …