[HTML][HTML] Integration strategies of multi-omics data for machine learning analysis
Increased availability of high-throughput technologies has generated an ever-growing
number of omics data that seek to portray many different but complementary biological …
number of omics data that seek to portray many different but complementary biological …
Multi-omics data integration, interpretation, and its application
I Subramanian, S Verma, S Kumar… - … and biology insights, 2020 - journals.sagepub.com
To study complex biological processes holistically, it is imperative to take an integrative
approach that combines multi-omics data to highlight the interrelationships of the involved …
approach that combines multi-omics data to highlight the interrelationships of the involved …
Integrated omics: tools, advances and future approaches
With the rapid adoption of high-throughput omic approaches to analyze biological samples
such as genomics, transcriptomics, proteomics, and metabolomics, each analysis can …
such as genomics, transcriptomics, proteomics, and metabolomics, each analysis can …
missMDA: a package for handling missing values in multivariate data analysis
We present the R package missMDA which performs principal component methods on
incomplete data sets, aiming to obtain scores, loadings and graphical representations …
incomplete data sets, aiming to obtain scores, loadings and graphical representations …
Multilevel omics for the discovery of biomarkers and therapeutic targets for stroke
Despite many years of research, no biomarkers for stroke are available to use in clinical
practice. Progress in high-throughput technologies has provided new opportunities to …
practice. Progress in high-throughput technologies has provided new opportunities to …
Dimension reduction techniques for the integrative analysis of multi-omics data
State-of-the-art next-generation sequencing, transcriptomics, proteomics and other high-
throughput 'omics' technologies enable the efficient generation of large experimental data …
throughput 'omics' technologies enable the efficient generation of large experimental data …
Multiple factor analysis: principal component analysis for multitable and multiblock data sets
Multiple factor analysis (MFA, also called multiple factorial analysis) is an extension of
principal component analysis (PCA) tailored to handle multiple data tables that measure …
principal component analysis (PCA) tailored to handle multiple data tables that measure …
NCBI GEO: archive for functional genomics data sets—10 years on
T Barrett, DB Troup, SE Wilhite, P Ledoux… - Nucleic acids …, 2010 - academic.oup.com
A decade ago, the Gene Expression Omnibus (GEO) database was established at the
National Center for Biotechnology Information (NCBI). The original objective of GEO was to …
National Center for Biotechnology Information (NCBI). The original objective of GEO was to …
A selective review of multi-level omics data integration using variable selection
High-throughput technologies have been used to generate a large amount of omics data. In
the past, single-level analysis has been extensively conducted where the omics …
the past, single-level analysis has been extensively conducted where the omics …
Analytical platform for metabolome analysis of microbial cells using methyl chloroformate derivatization followed by gas chromatography–mass spectrometry
KF Smart, RBM Aggio, JR Van Houtte… - Nature protocols, 2010 - nature.com
This protocol describes an analytical platform for the analysis of intra-and extracellular
metabolites of microbial cells (yeast, filamentous fungi and bacteria) using gas …
metabolites of microbial cells (yeast, filamentous fungi and bacteria) using gas …