The role of model checking in software engineering

AK Karna, Y Chen, H Yu, H Zhong, J Zhao - Frontiers of Computer Science, 2018 - Springer
Abstract Model checking is a formal verification technique. It takes an exhaustively strategy
to check hardware circuits and network protocols against desired properties. Having been …

Complexity of the dynamics of reaction systems

A Dennunzio, E Formenti, L Manzoni… - Information and …, 2019 - Elsevier
Reaction systems are discrete dynamical systems inspired by bio-chemical processes,
whose dynamical behaviour is expressed by set-theoretic operations on finite sets. Reaction …

Reaction systems: a model of computation inspired by the functioning of the living cell

A Ehrenfeucht, I Petre, G Rozenberg - The role of theory in …, 2017 - World Scientific
Reaction systems are a model of computation inspired by the functioning of the living cell.
They formalize the interactions between biochemical reactions that form the basic …

[HTML][HTML] Fixed points and attractors of reactantless and inhibitorless reaction systems

R Ascone, G Bernardini, L Manzoni - Theoretical Computer Science, 2024 - Elsevier
Reaction systems are discrete dynamical systems that model biochemical processes in
living cells using finite sets of reactants, inhibitors, and products. We investigate the …

[HTML][HTML] Steady states of constrained reaction systems

S Azimi - Theoretical Computer Science, 2017 - Elsevier
Reaction systems, a mathematical formalism inspired by the mechanisms within a biological
cell, focuses on an abstract set-based representation of chemical reactions via facilitation …

Controllability of reaction systems

S Ivanov, I Petre - Journal of Membrane Computing, 2020 - Springer
Controlling a dynamical system is the ability of changing its configuration arbitrarily through
a suitable choice of inputs. It is a very well-studied concept in control theory, with wide …

Evolvability of reaction systems and the invisibility theorem

WC Teh, J Lim - Theoretical Computer Science, 2022 - Elsevier
Many biological extensions and new features have been proposed on the original
framework of reaction systems, in this fast-growing and now well-established research area …

Fixed points and attractors of additive reaction systems

R Ascone, G Bernardini, L Manzoni - Natural Computing, 2024 - Springer
Reaction systems are discrete dynamical systems that simulate biological processes within
living cells through finite sets of reactants, inhibitors, and products. In this paper, we study …

Efficient simulation of reaction systems on graphics processing units

MS Nobile, AE Porreca, S Spolaor… - Fundamenta …, 2017 - content.iospress.com
Reaction systems represent a theoretical framework based on the regulation mechanisms of
facilitation and inhibition of biochemical reactions. The dynamic process defined by a …

Monotone control of R systems

R Yako, D Ise, K Komiya, K Fujimoto… - New Generation …, 2022 - Springer
R system is a mathematical model for analyzing bio-chemical reactions. This paper
proposes a framework on the control of R systems. In particular, we develop a theory of …