Deep learning with graph convolutional networks: An overview and latest applications in computational intelligence

UA Bhatti, H Tang, G Wu, S Marjan… - International Journal of …, 2023 - Wiley Online Library
Convolutional neural networks (CNNs) have received widespread attention due to their
powerful modeling capabilities and have been successfully applied in natural language …

Graph neural networks and their current applications in bioinformatics

XM Zhang, L Liang, L Liu, MJ Tang - Frontiers in genetics, 2021 - frontiersin.org
Graph neural networks (GNNs), as a branch of deep learning in non-Euclidean space,
perform particularly well in various tasks that process graph structure data. With the rapid …

SFGCN: synergetic fusion-based graph convolutional networks approach for link prediction in social networks

SW Lee, J Tanveer, AM Rahmani, H Alinejad-Rokny… - Information …, 2025 - Elsevier
Abstract Accurate Link Prediction (LP) in Social Networks (SNs) is crucial for various
practical applications, such as recommendation systems and network security. However …

Improving drug response prediction based on two-space graph convolution

W Peng, T Chen, H Liu, W Dai, N Yu, W Lan - Computers in Biology and …, 2023 - Elsevier
Patients with the same cancer types may present different genomic features and therefore
have different drug sensitivities. Accordingly, correctly predicting patients' responses to the …

Identifying candidate gene–disease associations via graph neural networks

P Cinaglia, M Cannataro - entropy, 2023 - mdpi.com
Real-world objects are usually defined in terms of their own relationships or connections. A
graph (or network) naturally expresses this model though nodes and edges. In biology …

Customized subgraph selection and encoding for drug-drug interaction prediction

H Du, Q Yao, J Zhang, Y Liu… - Advances in Neural …, 2025 - proceedings.neurips.cc
Subgraph-based methods have proven to be effective and interpretable in predicting drug-
drug interactions (DDIs), which are essential for medical practice and drug development …

Formulation graphs for map** structure-composition of battery electrolytes to device performance

V Sharma, M Giammona, D Zubarev… - Journal of Chemical …, 2023 - ACS Publications
Advanced computational methods are being actively sought to address the challenges
associated with the discovery and development of new combinatorial materials, such as …

Machine learning on properties of multiscale multisource hydroxyapatite nanoparticles datasets with different morphologies and sizes

Z Liu, Y Shi, H Chen, T Qin, X Zhou, J Huo… - npj Computational …, 2021 - nature.com
Abstract Machine learning models for exploring structure-property relation for hydroxyapatite
nanoparticles (HANPs) are still lacking. A multiscale multisource dataset is presented …

Cfg2vec: Hierarchical graph neural network for cross-architectural software reverse engineering

SY Yu, YG Achamyeleh, C Wang… - 2023 IEEE/ACM 45th …, 2023 - ieeexplore.ieee.org
Mission-critical embedded software is critical to our society's infrastructure but can be
subject to new security vulnerabilities as technology advances. When security issues arise …

Powerful graph of graphs neural network for structured entity analysis

H Wang, D Lian, W Liu, D Wen, C Chen, X Wang - World Wide Web, 2022 - Springer
Structured entities analysis is the basis of the modern science, such as chemical science,
biological science, environmental science and medical science. Recently, a huge amount of …