Infrared difference spectroscopy of proteins: from bands to bonds

VA Lorenz-Fonfria - Chemical reviews, 2020 - ACS Publications
Infrared difference spectroscopy probes vibrational changes of proteins upon their
perturbation. Compared with other spectroscopic methods, it stands out by its sensitivity to …

Simulating coherent multidimensional spectroscopy of nonadiabatic molecular processes: From the infrared to the x-ray regime

M Kowalewski, BP Fingerhut, KE Dorfman… - Chemical …, 2017 - ACS Publications
Crossings of electronic potential energy surfaces in nuclear configuration space, known as
conical intersections, determine the rates and outcomes of a large class of photochemical …

Femtosecond structural dynamics drives the trans/cis isomerization in photoactive yellow protein

K Pande, CDM Hutchison, G Groenhof, A Aquila… - Science, 2016 - science.org
A variety of organisms have evolved mechanisms to detect and respond to light, in which the
response is mediated by protein structural changes after photon absorption. The initial step …

Volume-conserving transcis isomerization pathways in photoactive yellow protein visualized by picosecond X-ray crystallography

YO Jung, JH Lee, J Kim, M Schmidt, K Moffat… - Nature …, 2013 - nature.com
Trans-to-cis isomerization, the key reaction in photoactive proteins, usually cannot occur
through the standard one-bond-flip mechanism. Owing to spatial constraints imposed by a …

Probing structure and reaction dynamics of proteins using time-resolved resonance Raman spectroscopy

D Buhrke, P Hildebrandt - Chemical reviews, 2019 - ACS Publications
The mechanistic understanding of protein functions requires insight into the structural and
reaction dynamics. To elucidate these processes, a variety of experimental approaches are …

Mechanistic studies of photoinduced spin crossover and electron transfer in inorganic complexes

W Zhang, KJ Gaffney - Accounts of chemical research, 2015 - ACS Publications
Conspectus Electronic excited-state phenomena provide a compelling intersection of
fundamental and applied research interests in the chemical sciences. This holds true for …

Photoinduced proton coupled electron transfer in 2-(2′-hydroxyphenyl)-benzothiazole

S Luber, K Adamczyk, ETJ Nibbering… - The Journal of Physical …, 2013 - ACS Publications
We characterize the structural and electronic changes during the photoinduced enol–keto
tautomerization of 2-(2′-hydroxyphenyl)-benzothiazole (HBT) in a nonpolar solvent …

Probing the early stages of photoreception in photoactive yellow protein with ultrafast time-domain Raman spectroscopy

H Kuramochi, S Takeuchi, K Yonezawa, H Kamikubo… - Nature Chemistry, 2017 - nature.com
Unveiling the nuclear motions of photoreceptor proteins in action is a crucial goal in protein
science in order to understand their elaborate mechanisms and how they achieve optimal …

Photoreceptors take charge: emerging principles for light sensing

T Kottke, A **e, DS Larsen… - Annual review of …, 2018 - annualreviews.org
The first stage in biological signaling is based on changes in the functional state of a
receptor protein triggered by interaction of the receptor with its ligand (s). The light-triggered …

Ultrafast proton-coupled isomerization in the phototransformation of phytochrome

Y Yang, T Stensitzki, L Sauthof, A Schmidt… - Nature Chemistry, 2022 - nature.com
The biological function of phytochromes is triggered by an ultrafast photoisomerization of the
tetrapyrrole chromophore biliverdin between two rings denoted C and D. The mechanism by …