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Finding the genomic basis of local adaptation: pitfalls, practical solutions, and future directions
Uncovering the genetic and evolutionary basis of local adaptation is a major focus of
evolutionary biology. The recent development of cost-effective methods for obtaining high …
evolutionary biology. The recent development of cost-effective methods for obtaining high …
A practical guide to environmental association analysis in landscape genomics
Landscape genomics is an emerging research field that aims to identify the environmental
factors that shape adaptive genetic variation and the gene variants that drive local …
factors that shape adaptive genetic variation and the gene variants that drive local …
Evolutionary genomics can improve prediction of species' responses to climate change
Global climate change (GCC) increasingly threatens biodiversity through the loss of species,
and the transformation of entire ecosystems. Many species are challenged by the pace of …
and the transformation of entire ecosystems. Many species are challenged by the pace of …
Comparing methods for detecting multilocus adaptation with multivariate genotype–environment associations
Identifying adaptive loci can provide insight into the mechanisms underlying local
adaptation. Genotype–environment association (GEA) methods, which identify these loci …
adaptation. Genotype–environment association (GEA) methods, which identify these loci …
The paradox of adaptive trait clines with nonclinal patterns in the underlying genes
Multivariate climate change presents an urgent need to understand how species adapt to
complex environments. Population genetic theory predicts that loci under selection will form …
complex environments. Population genetic theory predicts that loci under selection will form …
Reliable Detection of Loci Responsible for Local Adaptation: Inference of a Null Model through Trimming the Distribution of FST
Loci responsible for local adaptation are likely to have more genetic differentiation among
populations than neutral loci. However, neutral loci can vary widely in their amount of …
populations than neutral loci. However, neutral loci can vary widely in their amount of …
LFMM 2: fast and accurate inference of gene-environment associations in genome-wide studies
Gene-environment association (GEA) studies are essential to understand the past and
ongoing adaptations of organisms to their environment, but those studies are complicated by …
ongoing adaptations of organisms to their environment, but those studies are complicated by …
Ecological genomics meets community‐level modelling of biodiversity: Map** the genomic landscape of current and future environmental adaptation
Local adaptation is a central feature of most species occupying spatially heterogeneous
environments, and may factor critically in responses to environmental change. However …
environments, and may factor critically in responses to environmental change. However …
Genome-wide scan for adaptive divergence and association with population-specific covariates
In population genomics studies, accounting for the neutral covariance structure across
population allele frequencies is critical to improve the robustness of genome-wide scan …
population allele frequencies is critical to improve the robustness of genome-wide scan …
Common garden experiments in the genomic era: new perspectives and opportunities
The study of local adaptation is rendered difficult by many evolutionary confounding
phenomena (for example, genetic drift and demographic history). When complex traits are …
phenomena (for example, genetic drift and demographic history). When complex traits are …