Molecular and evolutionary determinants of bacteriophage host range

PA de Jonge, FL Nobrega, SJJ Brouns, BE Dutilh - Trends in microbiology, 2019 - cell.com
The host range of a bacteriophage is the taxonomic diversity of hosts it can successfully
infect. Host range, one of the central traits to understand in phages, is determined by a range …

Antibiotic resistance in agricultural soils: Source, fate, mechanism and attenuation strategy

J Wang, L Wang, L Zhu, J Wang… - Critical Reviews in …, 2022 - Taylor & Francis
Antibiotic resistance in agricultural soils is a significant environmental and health challenge
worldwide. To minimize the risk of antibiotic resistance, it is important to understand the fate …

Enhanced mutualistic symbiosis between soil phages and bacteria with elevated chromium-induced environmental stress

D Huang, P Yu, M Ye, C Schwarz, X Jiang, PJJ Alvarez - Microbiome, 2021 - Springer
Background Microbe–virus interactions have broad implications on the composition,
function, and evolution of microbiomes. Elucidating the effects of environmental stresses on …

Phthalate esters released from plastics promote biofilm formation and chlorine resistance

H Wang, P Yu, C Schwarz, B Zhang… - Environmental …, 2022 - ACS Publications
Phthalate esters (PAEs) are commonly released from plastic pipes in some water distribution
systems. Here, we show that exposure to a low concentration (1–10 μg/L) of three PAEs …

Going viral: emerging opportunities for phage-based bacterial control in water treatment and reuse

J Mathieu, P Yu, P Zuo, MLB Da Silva… - Accounts of chemical …, 2019 - ACS Publications
Conspectus Water security to protect human lives and support sustainable development is
one of the greatest global challenges of this century. While a myriad of water pollutants can …

[HTML][HTML] A review of bacteriophage therapy for pathogenic bacteria inactivation in the soil environment

M Ye, M Sun, D Huang, Z Zhang, H Zhang… - Environment …, 2019 - Elsevier
The emerging contamination of pathogenic bacteria in the soil has caused a serious threat
to public health and environmental security. Therefore, effective methods to inactivate …

[HTML][HTML] Viral community structure and functional potential vary with lifestyle and altitude in soils of Mt. Everest

Y Zhu, Y Zhang, S Yan, X Chen, S **e - Environment International, 2023 - Elsevier
More and more focus has been placed on the processes by which viruses interact with
bacteria to influence the biogeochemical cycles. The intricacy of soil matrix and the …

Validation of the application of gel beads-based single-cell genome sequencing platform to soil and seawater

Y Nishikawa, M Kogawa, M Hosokawa… - ISME …, 2022 - academic.oup.com
Single-cell genomics is applied to environmental samples as a method to solve the
problems of current metagenomics. However, in the fluorescence-activated cell sorting …

Advances in bacteriophage-mediated strategies for combating polymicrobial biofilms

M Gliźniewicz, D Miłek, P Olszewska… - Frontiers in …, 2024 - frontiersin.org
Bacteria and fungi tend to coexist within biofilms instead of in planktonic states. Usually,
such communities include cross-kingdom microorganisms, which make them harder to …

Bacterial inactivation and biofilm disruption through indigenous prophage activation using low-intensity cold atmospheric plasma

X Gu, D Huang, J Chen, X Li, Y Zhou… - Environmental …, 2022 - ACS Publications
Biofilms can be pervasive and problematic in water treatment and distribution systems but
are difficult to eradicate due to hindered penetration of antimicrobial chemicals. Here, we …