[HTML][HTML] Impact of evolutionary relatedness on species diversification and tree shape
Slowdowns in lineage accumulation are often observed in phylogenies of extant species.
One explanation is the presence of ecological limits to diversity and hence to diversification …
One explanation is the presence of ecological limits to diversity and hence to diversification …
PhyloCNN: Improving tree representation and neural network architecture for deep learning from trees in phylodynamics and diversification studies
Phylodynamics and diversification studies using complex evolutionary models can be
challenging, especially with traditional likelihood-based approaches. As an alternative …
challenging, especially with traditional likelihood-based approaches. As an alternative …
A theoretical framework linking the birth-death and protracted birth-death models, with implications for the phylogenetic analysis of diversification
Standard birth-death processes used in macroevolutionary studies assume instantaneous
speciation, an unrealistic premise that limits the interpretation of speciation and extinction …
speciation, an unrealistic premise that limits the interpretation of speciation and extinction …
Designing minimal E. coli genomes using variational autoencoders
Designing minimal bacterial genomes remains a key challenge in synthetic biology. There is
currently a lack of efficient tools for the rapid generation of streamlined bacterial genomes …
currently a lack of efficient tools for the rapid generation of streamlined bacterial genomes …
[PDF][PDF] Speciation completion rates have limited impact
Birth-death models are widely used to understand the diversification of species groups; 30 in
this context, births represent speciation events, ie the emergence of two daughter 31 species …
this context, births represent speciation events, ie the emergence of two daughter 31 species …
Impact of Evolutionary Relatedness on Species Diversification: A New Birth-Death Model
Slowdowns in lineage accumulation are often observed in phylogenies of extant species.
One explanation for this is the presence of ecological limits to diversity and hence to …
One explanation for this is the presence of ecological limits to diversity and hence to …
Speciation completion rates have limited impact on macroevolutionary diversification
While speciation takes time, standard birth-death processes used to infer diversification from
phylogenies assume that it is instantaneous. This limits the interpretation of phylogenetic …
phylogenies assume that it is instantaneous. This limits the interpretation of phylogenetic …