The genetics of multiple sclerosis: from 0 to 200 in 50 years
SE Baranzini, JR Oksenberg - Trends in genetics, 2017 - cell.com
Multiple sclerosis (MS) is a common autoimmune disease that targets myelin in the central
nervous system (CNS). Multiple genome-wide association studies (GWAS) over the past 10 …
nervous system (CNS). Multiple genome-wide association studies (GWAS) over the past 10 …
Evolution of transcription factor binding in metazoans—mechanisms and functional implications
Differences in transcription factor binding can contribute to organismal evolution by altering
downstream gene expression programmes. Genome-wide studies in Drosophila …
downstream gene expression programmes. Genome-wide studies in Drosophila …
Multiple sclerosis genomic map implicates peripheral immune cells and microglia in susceptibility
International Multiple Sclerosis Genetics Consortium*†… - Science, 2019 - science.org
INTRODUCTION Multiple sclerosis (MS) is an inflammatory and degenerative disease of the
central nervous system (CNS) that often presents in young adults. Over the past decade …
central nervous system (CNS) that often presents in young adults. Over the past decade …
[HTML][HTML] Waves of retrotransposon expansion remodel genome organization and CTCF binding in multiple mammalian lineages
CTCF-binding locations represent regulatory sequences that are highly constrained over the
course of evolution. To gain insight into how these DNA elements are conserved and spread …
course of evolution. To gain insight into how these DNA elements are conserved and spread …
ChIPBase: a database for decoding the transcriptional regulation of long non-coding RNA and microRNA genes from ChIP-Seq data
Long non-coding RNAs (lncRNAs) and microRNAs (miRNAs) represent two classes of
important non-coding RNAs in eukaryotes. Although these non-coding RNAs have been …
important non-coding RNAs in eukaryotes. Although these non-coding RNAs have been …
Genome-wide nucleosome positioning during embryonic stem cell development
We determined genome-wide nucleosome occupancies in mouse embryonic stem cells and
their neural progenitor and embryonic fibroblast counterparts to assess features associated …
their neural progenitor and embryonic fibroblast counterparts to assess features associated …
Develo** in 3D: the role of CTCF in cell differentiation
RG Arzate-Mejía, F Recillas-Targa… - Development, 2018 - journals.biologists.com
ABSTRACT CTCF is a highly conserved zinc-finger DNA-binding protein that mediates
interactions between distant sequences in the genome. As a consequence, CTCF regulates …
interactions between distant sequences in the genome. As a consequence, CTCF regulates …
CTCF regulates the human p53 gene through direct interaction with its natural antisense transcript, Wrap53
R Saldaña-Meyer, E González-Buendía… - Genes & …, 2014 - genesdev.cshlp.org
The multifunctional CCCTC-binding factor (CTCF) protein exhibits a broad range of
functions, including that of insulator and higher-order chromatin organizer. We found that …
functions, including that of insulator and higher-order chromatin organizer. We found that …
De novo prediction of DNA-binding specificities for Cys2His2 zinc finger proteins
AV Persikov, M Singh - Nucleic acids research, 2014 - academic.oup.com
Proteins with sequence-specific DNA binding function are important for a wide range of
biological activities. De novo prediction of their DNA-binding specificities from sequence …
biological activities. De novo prediction of their DNA-binding specificities from sequence …
Functional analysis of transcription factor binding sites in human promoters
Background The binding of transcription factors to specific locations in the genome is
integral to the orchestration of transcriptional regulation in cells. To characterize transcription …
integral to the orchestration of transcriptional regulation in cells. To characterize transcription …