Repbase Update: a database and an electronic journal of repetitive elements

J Jurka - Trends in genetics, 2000 - cell.com
2 Schuler, GD et al.(1997) Pieces of the puzzle: expressed sequence tags and the catalogue
of human genes. J. Mol. Med. 75, 694–698 3 Boguski, MS and Schuler, GD (1995) …

Gene duplication as a major force in evolution

S Magadum, U Banerjee, P Murugan, D Gangapur… - Journal of genetics, 2013 - Springer
Gene duplication is an important mechanism for acquiring new genes and creating genetic
novelty in organisms. Many new gene functions have evolved through gene duplication and …

Analysis of the genome sequence of the flowering plant Arabidopsis thaliana

… genomeanalysis@ tgr. org genomeanalysis@ gsf. de - nature, 2000 - nature.com
The flowering plant Arabidopsis thaliana is an important model system for identifying genes
and determining their functions. Here we report the analysis of the genomic sequence of …

Arabidopsis Transcription Factors: Genome-Wide Comparative Analysis Among Eukaryotes

JL Riechmann, J Heard, G Martin, L Reuber, CZ Jiang… - science, 2000 - science.org
The completion of the Arabidopsis thaliana genome sequence allows a comparative
analysis of transcriptional regulators across the three eukaryotic kingdoms. Arabidopsis …

Genome sequencing and analysis of the model grass Brachypodium distachyon

DNA sequencing and assembly Barry Kerrie 5 Lucas … - Nature, 2010 - nature.com
Three subfamilies of grasses, the Ehrhartoideae, Panicoideae and Pooideae, provide the
bulk of human nutrition and are poised to become major sources of renewable energy. Here …

Arabidopsis transcriptome profiling indicates that multiple regulatory pathways are activated during cold acclimation in addition to the CBF cold response pathway

S Fowler, MF Thomashow - The Plant Cell, 2002 - academic.oup.com
Many plants, including Arabidopsis, increase in freezing tolerance in response to low,
nonfreezing temperatures, a phenomenon known as cold acclimation. Previous studies …

Comprehensive analysis of CpG islands in human chromosomes 21 and 22

D Takai, PA Jones - Proceedings of the national academy of …, 2002 - National Acad Sciences
CpG islands are useful markers for genes in organisms containing 5-methylcytosine in their
genomes. In addition, CpG islands located in the promoter regions of genes can play …

[HTML][HTML] The SHORT-ROOT gene controls radial patterning of the Arabidopsis root through radial signaling

Y Helariutta, H Fukaki, J Wysocka-Diller, K Nakajima… - Cell, 2000 - cell.com
Asymmetric cell divisions play an important role in the establishment and propagation of the
cellular pattern of plant tissues. The SHORT-ROOT (SHR) gene is required for the …

Monitoring the expression pattern of 1300 Arabidopsis genes under drought and cold stresses by using a full-length cDNA microarray

M Seki, M Narusaka, H Abe, M Kasuga… - The Plant …, 2001 - academic.oup.com
Full-length cDNAs are essential for functional analysis of plant genes. Using the biotinylated
CAP trapper method, we constructed full-length Arabidopsis cDNA libraries from plants in …

The Origins of Genomic Duplications in Arabidopsis

TJ Vision, DG Brown, SD Tanksley - Science, 2000 - science.org
Large segmental duplications cover much of the Arabidopsis thaliana genome. Little is
known about their origins. We show that they are primarily due to at least four different large …