Ten things you should know about transposable elements

G Bourque, KH Burns, M Gehring, V Gorbunova… - Genome biology, 2018 - Springer
Transposable elements (TEs) are major components of eukaryotic genomes. However, the
extent of their impact on genome evolution, function, and disease remain a matter of intense …

Mechanisms of stress in the brain

BS McEwen, NP Bowles, JD Gray, MN Hill… - Nature …, 2015 - nature.com
The brain is the central organ involved in perceiving and adapting to social and physical
stressors via multiple interacting mediators, from the cell surface to the cytoskeleton to …

L1 drives IFN in senescent cells and promotes age-associated inflammation

M De Cecco, T Ito, AP Petrashen, AE Elias, NJ Skvir… - Nature, 2019 - nature.com
Retrotransposable elements are deleterious at many levels, and the failure of host
surveillance systems for these elements can thus have negative consequences. However …

The octopus genome and the evolution of cephalopod neural and morphological novelties

CB Albertin, O Simakov, T Mitros, ZY Wang, JR Pungor… - Nature, 2015 - nature.com
Coleoid cephalopods (octopus, squid and cuttlefish) are active, resourceful predators with a
rich behavioural repertoire. They have the largest nervous systems among the invertebrates …

Restricting retrotransposons: a review

JL Goodier - Mobile DNA, 2016 - Springer
Retrotransposons have generated about 40% of the human genome. This review examines
the strategies the cell has evolved to coexist with these genomic “parasites”, focussing on …

KRAB zinc finger proteins

G Ecco, M Imbeault, D Trono - Development, 2017 - journals.biologists.com
Krüppel-associated box domain zinc finger proteins (KRAB-ZFPs) are the largest family of
transcriptional regulators in higher vertebrates. Characterized by an N-terminal KRAB …

Losing DNA methylation at repetitive elements and breaking bad

XG Pappalardo, V Barra - Epigenetics & chromatin, 2021 - Springer
Background DNA methylation is an epigenetic chromatin mark that allows heterochromatin
formation and gene silencing. It has a fundamental role in preserving genome stability …

Identifying transposable element expression dynamics and heterogeneity during development at the single-cell level with a processing pipeline scTE

J He, IA Babarinde, L Sun, S Xu, R Chen, J Shi… - Nature …, 2021 - nature.com
Transposable elements (TEs) make up a majority of a typical eukaryote's genome, and
contribute to cell heterogeneity in unclear ways. Single-cell sequencing technologies are …

Advanced applications of RNA sequencing and challenges

Y Han, S Gao, K Muegge, W Zhang… - … and biology insights, 2015 - journals.sagepub.com
Next-generation sequencing technologies have revolutionarily advanced sequence-based
research with the advantages of high-throughput, high-sensitivity, and high-speed. RNA-seq …

Mutation and human exceptionalism: our future genetic load

M Lynch - Genetics, 2016 - academic.oup.com
Although the human germline mutation rate is higher than that in any other well-studied
species, the rate is not exceptional once the effective genome size and effective population …