[HTML][HTML] Networks beyond pairwise interactions: Structure and dynamics
The complexity of many biological, social and technological systems stems from the richness
of the interactions among their units. Over the past decades, a variety of complex systems …
of the interactions among their units. Over the past decades, a variety of complex systems …
A mini review of node centrality metrics in biological networks
The diversity of nodes in a complex network causes each node to have varying significance,
and the important nodes often have a significant impact on the structure and function of the …
and the important nodes often have a significant impact on the structure and function of the …
Superhypergraph neural networks and plithogenic graph neural networks: Theoretical foundations
T Fujita - arxiv preprint arxiv:2412.01176, 2024 - arxiv.org
Hypergraphs extend traditional graphs by allowing edges to connect multiple nodes, while
superhypergraphs further generalize this concept to represent even more complex …
superhypergraphs further generalize this concept to represent even more complex …
Analytical methods in untargeted metabolomics: state of the art in 2015
Metabolomics comprises the methods and techniques that are used to measure the small
molecule composition of biofluids and tissues, and is actually one of the most rapidly …
molecule composition of biofluids and tissues, and is actually one of the most rapidly …
Survey of intersection graphs, fuzzy graphs and neutrosophic graphs
T Fujita - … and Uncertainization: Fuzzy, Neutrosophic, Soft, Rough …, 2024 - books.google.com
Graph theory is afundamental branch of mathematicsthat studiesnetworksconsisting of
nodes (vertices) and their connections (edges). Extensive research has been conducted on …
nodes (vertices) and their connections (edges). Extensive research has been conducted on …
Graphpim: Enabling instruction-level pim offloading in graph computing frameworks
With the emergence of data science, graph computing has become increasingly important
these days. Unfortunately, graph computing typically suffers from poor performance when …
these days. Unfortunately, graph computing typically suffers from poor performance when …
[HTML][HTML] Study of biological networks using graph theory
W Gao, H Wu, MK Siddiqui, AQ Baig - Saudi journal of biological sciences, 2018 - Elsevier
As an effective modeling, analysis and computational tool, graph theory is widely used in
biological mathematics to deal with various biology problems. In the field of microbiology …
biological mathematics to deal with various biology problems. In the field of microbiology …
Web-based inference of biological patterns, functions and pathways from metabolomic data using MetaboAnalyst
J **a, DS Wishart - Nature protocols, 2011 - nature.com
MetaboAnalyst is an integrated web-based platform for comprehensive analysis of
quantitative metabolomic data. It is designed to be used by biologists (with little or no …
quantitative metabolomic data. It is designed to be used by biologists (with little or no …
Targeting Lactobacillus johnsonii to reverse chronic kidney disease
H Miao, F Liu, YN Wang, XY Yu, S Zhuang… - … and Targeted Therapy, 2024 - nature.com
Accumulated evidence suggested that gut microbial dysbiosis interplayed with progressive
chronic kidney disease (CKD). However, no available therapy is effective in suppressing …
chronic kidney disease (CKD). However, no available therapy is effective in suppressing …
Methods for biological data integration: perspectives and challenges
V Gligorijević, N Pržulj - Journal of the Royal Society …, 2015 - royalsocietypublishing.org
Rapid technological advances have led to the production of different types of biological data
and enabled construction of complex networks with various types of interactions between …
and enabled construction of complex networks with various types of interactions between …