[HTML][HTML] Research progress of nature-inspired metaheuristic algorithms in mobile robot path planning

Y Xu, Q Li, X Xu, J Yang, Y Chen - Electronics, 2023 - mdpi.com
The research of mobile robot path planning has shifted from the static environment to the
dynamic environment, from the two-dimensional environment to the high-dimensional …

Structure of an E3: E2∼ Ub complex reveals an allosteric mechanism shared among RING/U-box ligases

JN Pruneda, PJ Littlefield, SE Soss, KA Nordquist… - Molecular cell, 2012 - cell.com
Despite the widespread importance of RING/U-box E3 ubiquitin ligases in ubiquitin (Ub)
signaling, the mechanism by which this class of enzymes facilitates Ub transfer remains …

Dynamic activation of an allosteric regulatory protein

SR Tzeng, CG Kalodimos - Nature, 2009 - nature.com
Allosteric regulation is used as a very efficient mechanism to control protein activity in most
biological processes, including signal transduction, metabolism, catalysis and gene …

A practical guide to protein dynamics from 15N spin relaxation in solution

S Morin - Progress in nuclear magnetic resonance spectroscopy, 2011 - Elsevier
It is now well accepted that structures alone cannot explain protein function and biochemical
data. Indeed, dynamics on different timescales play an important role in their function. Many …

Dynamics of proteins in solution

M Grimaldo, F Roosen-Runge, F Zhang… - Quarterly Reviews of …, 2019 - cambridge.org
The dynamics of proteins in solution includes a variety of processes, such as backbone and
side-chain fluctuations, interdomain motions, as well as global rotational and translational …

Interplay between conformational entropy and solvation entropy in protein–ligand binding

ML Verteramo, O Stenstrom, MM Ignjatovic… - Journal of the …, 2019 - ACS Publications
Understanding the driving forces underlying molecular recognition is of fundamental
importance in chemistry and biology. The challenge is to unravel the binding …

Protein flexibility and conformational entropy in ligand design targeting the carbohydrate recognition domain of galectin-3

C Diehl, O Engstrom, T Delaine… - Journal of the …, 2010 - ACS Publications
Rational drug design is predicated on knowledge of the three-dimensional structure of the
protein− ligand complex and the thermodynamics of ligand binding. Despite the …

Optimisation of NMR dynamic models II. A new methodology for the dual optimisation of the model-free parameters and the Brownian rotational diffusion tensor

EJ d'Auvergne, PR Gooley - Journal of biomolecular NMR, 2008 - Springer
Finding the dynamics of an entire macromolecule is a complex problem as the model-free
parameter values are intricately linked to the Brownian rotational diffusion of the molecule …

RNA modifications stabilize the tertiary structure of tRNAfMet by locally increasing conformational dynamics

T Biedenbänder, V de Jesus… - Nucleic acids …, 2022 - academic.oup.com
A plethora of modified nucleotides extends the chemical and conformational space for
natural occurring RNAs. tRNAs constitute the class of RNAs with the highest modification …

Effects of molecular crowding on the dynamics of intrinsically disordered proteins

EA Cino, M Karttunen, WY Choy - PLoS One, 2012 - journals.plos.org
Inside cells, the concentration of macromolecules can reach up to 400 g/L. In such crowded
environments, proteins are expected to behave differently than in vitro. It has been shown …