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Fundamental aspects of protein− protein association kinetics
The structure of a protein complex together with information about its affinity and other
thermodynamic characteristics provide a “frozen” view of the complex. This picture ignores …
thermodynamic characteristics provide a “frozen” view of the complex. This picture ignores …
Transient protein–protein interactions
Transient complexes are crucial for diverse biological processes such as biochemical
pathways and signaling cascades in the cell. Here, we give an overview of the transient …
pathways and signaling cascades in the cell. Here, we give an overview of the transient …
Complete protein–protein association kinetics in atomic detail revealed by molecular dynamics simulations and Markov modelling
Protein–protein association is fundamental to many life processes. However, a microscopic
model describing the structures and kinetics during association and dissociation is lacking …
model describing the structures and kinetics during association and dissociation is lacking …
Crucial HSP70 co-chaperone complex unlocks metazoan protein disaggregation
NB Nillegoda, J Kirstein, A Szlachcic, M Berynskyy… - Nature, 2015 - nature.com
Protein aggregates are the hallmark of stressed and ageing cells, and characterize several
pathophysiological states,. Healthy metazoan cells effectively eliminate intracellular protein …
pathophysiological states,. Healthy metazoan cells effectively eliminate intracellular protein …
Diffusion, crowding & protein stability in a dynamic molecular model of the bacterial cytoplasm
A longstanding question in molecular biology is the extent to which the behavior of
macromolecules observed in vitro accurately reflects their behavior in vivo. A number of …
macromolecules observed in vitro accurately reflects their behavior in vivo. A number of …
Thermodynamics and kinetics of actin filament nucleation
We have performed computer simulations and free energy calculations to determine the
thermodynamics and kinetics of actin nucleation and thus identify a probable nucleation …
thermodynamics and kinetics of actin nucleation and thus identify a probable nucleation …
Models of macromolecular crowding effects and the need for quantitative comparisons with experiment
AH Elcock - Current opinion in structural biology, 2010 - Elsevier
In recent years significant effort has been devoted to exploring the potential effects of
macromolecular crowding on protein folding and association phenomena. Theoretical …
macromolecular crowding on protein folding and association phenomena. Theoretical …
Rational design of faster associating and tighter binding protein complexes
T Selzer, S Albeck, G Schreiber - Nature structural biology, 2000 - nature.com
A protein design strategy was developed to specifically enhance the rate of association (k
on) between a pair of proteins without affecting the rate of dissociation (k off). The method is …
on) between a pair of proteins without affecting the rate of dissociation (k off). The method is …
Unbinding forces of single antibody-antigen complexes correlate with their thermal dissociation rates
Point mutants of three unrelated antifluorescein antibodies were constructed to obtain nine
different single-chain Fv fragments, whose on-rates, off-rates, and equilibrium binding …
different single-chain Fv fragments, whose on-rates, off-rates, and equilibrium binding …
Bovine β-lactoglobulin is dimeric under imitative physiological conditions: dissociation equilibrium and rate constants over the pH range of 2.5–7.5
The oligomerization of β-lactoglobulin (βLg) has been studied extensively, but with
somewhat contradictory results. Using analytical ultracentrifugation in both sedimentation …
somewhat contradictory results. Using analytical ultracentrifugation in both sedimentation …