Computational and statistical analysis of metabolomics data
Metabolomics is the comprehensive study of small molecule metabolites in biological
systems. By assaying and analyzing thousands of metabolites in biological samples, it …
systems. By assaying and analyzing thousands of metabolites in biological samples, it …
[HTML][HTML] Multi-omics and metabolic modelling pipelines: challenges and tools for systems microbiology
Integrated-omics approaches are quickly spreading across microbiology research labs,
leading to (i) the possibility of detecting previously hidden features of microbial cells like …
leading to (i) the possibility of detecting previously hidden features of microbial cells like …
Integrated omics analysis of specialized metabolism in medicinal plants
Medicinal plants are a rich source of highly diverse specialized metabolites with important
pharmacological properties. Until recently, plant biologists were limited in their ability to …
pharmacological properties. Until recently, plant biologists were limited in their ability to …
Genomics of lactic acid bacteria: Current status and potential applications
C Wu, J Huang, R Zhou - Critical Reviews in Microbiology, 2017 - Taylor & Francis
Lactic acid bacteria (LAB) are widely used for the production of a variety of foods and feed
raw materials where they contribute to flavor and texture of the fermented products. In …
raw materials where they contribute to flavor and texture of the fermented products. In …
[HTML][HTML] Metabolomics and modelling approaches for systems metabolic engineering
JK Khanijou, H Kulyk, C Bergès, LW Khoo, P Ng… - Metabolic Engineering …, 2022 - Elsevier
Metabolic engineering involves the manipulation of microbes to produce desirable
compounds through genetic engineering or synthetic biology approaches. Metabolomics …
compounds through genetic engineering or synthetic biology approaches. Metabolomics …
Influence of HEK293 metabolism on the production of viral vectors and vaccine
Mammalian cell cultures are increasingly used for the production of complex
biopharmaceuticals including viral vectors and vaccines. HEK293 is the predominant cell …
biopharmaceuticals including viral vectors and vaccines. HEK293 is the predominant cell …
Green genes: bioinformatics and systems-biology innovations drive algal biotechnology
Many species of microalgae produce hydrocarbons, polysaccharides, and other valuable
products in significant amounts. However, large-scale production of algal products is not yet …
products in significant amounts. However, large-scale production of algal products is not yet …
Plant metabolic modeling: achieving new insight into metabolism and metabolic engineering
Abstract Models are used to represent aspects of the real world for specific purposes, and
mathematical models have opened up new approaches in studying the behavior and …
mathematical models have opened up new approaches in studying the behavior and …
A genome-scale metabolic flux model of Escherichia coli K–12 derived from the EcoCyc database
Background Constraint-based models of Escherichia coli metabolic flux have played a key
role in computational studies of cellular metabolism at the genome scale. We sought to …
role in computational studies of cellular metabolism at the genome scale. We sought to …
A genome-scale metabolic model of potato late blight suggests a photosynthesis suppression mechanism
Background Phytophthora infestans is a plant pathogen that causes an important plant
disease known as late blight in potato plants (Solanum tuberosum) and several other …
disease known as late blight in potato plants (Solanum tuberosum) and several other …