[HTML][HTML] Neurodegeneration cell per cell
The clinical definition of neurodegenerative diseases is based on symptoms that reflect
terminal damage of specific brain regions. This is misleading as it tells little about the initial …
terminal damage of specific brain regions. This is misleading as it tells little about the initial …
CRISPR screening in hematology research: from bulk to single-cell level
The CRISPR genome editing technology has revolutionized the way gene function is
studied. Genome editing can be achieved in single genes or for thousands of genes …
studied. Genome editing can be achieved in single genes or for thousands of genes …
Joint single-cell measurements of nuclear proteins and RNA in vivo
Identifying gene-regulatory targets of nuclear proteins in tissues is a challenge. Here we
describe intranuclear cellular indexing of transcriptomes and epitopes (inCITE-seq), a …
describe intranuclear cellular indexing of transcriptomes and epitopes (inCITE-seq), a …
NEAT-seq: simultaneous profiling of intra-nuclear proteins, chromatin accessibility and gene expression in single cells
In this work, we describe NEAT-seq (sequencing of nuclear protein epitope abundance,
chromatin accessibility and the transcriptome in single cells), enabling interrogation of …
chromatin accessibility and the transcriptome in single cells), enabling interrogation of …
MUON: multimodal omics analysis framework
Advances in multi-omics have led to an explosion of multimodal datasets to address
questions from basic biology to translation. While these data provide novel opportunities for …
questions from basic biology to translation. While these data provide novel opportunities for …
Hydrop enables droplet-based single-cell ATAC-seq and single-cell RNA-seq using dissolvable hydrogel beads
FV De Rop, JN Ismail, CB González-Blas… - Elife, 2022 - elifesciences.org
Single-cell RNA-seq and single-cell assay for transposase-accessible chromatin (ATAC-
seq) technologies are used extensively to create cell type atlases for a wide range of …
seq) technologies are used extensively to create cell type atlases for a wide range of …
Phospho-seq: Integrated, multi-modal profiling of intracellular protein dynamics in single cells
Cell signaling plays a critical role in neurodevelopment, regulating cellular behavior and
fate. While multimodal single-cell sequencing technologies are rapidly advancing, scalable …
fate. While multimodal single-cell sequencing technologies are rapidly advancing, scalable …
Multiplexed single-cell analysis of organoid signaling networks
Organoids are biomimetic tissue models comprising multiple cell types and cell states. Post-
translational modification (PTM) signaling networks control cellular phenotypes and are …
translational modification (PTM) signaling networks control cellular phenotypes and are …
High-throughput microfluidic droplets in biomolecular analytical system: A review
L Zhang, R Parvin, M Chen, D Hu, Q Fan… - Biosensors and …, 2023 - Elsevier
Droplet microfluidic technology has revolutionized biomolecular analytical research, as it
has the capability to reserve the genotype-to-phenotype linkage and assist for revealing the …
has the capability to reserve the genotype-to-phenotype linkage and assist for revealing the …
Progress in single-cell multimodal sequencing and multi-omics data integration
With the rapid advance of single-cell sequencing technology, cell heterogeneity in various
biological processes was dissected at different omics levels. However, single-cell mono …
biological processes was dissected at different omics levels. However, single-cell mono …