Single-molecule studies of protein folding

A Borgia, PM Williams, J Clarke - Annu. Rev. Biochem., 2008 - annualreviews.org
Although protein-folding studies began several decades ago, it is only recently that the tools
to analyze protein folding at the single-molecule level have been developed. Advances in …

Biological Significance and Applications of Heme c Proteins and Peptides

JG Kleingardner, KL Bren - Accounts of chemical research, 2015 - ACS Publications
Conspectus Hemes are ubiquitous in biology and carry out a wide range of functions. The
heme group is largely invariant across proteins with different functions, although there are a …

NMR and DFT Investigation of Heme Ruffling: Functional Implications for Cytochrome c

MD Liptak, X Wen, KL Bren - Journal of the American Chemical …, 2010 - ACS Publications
Out-of-plane (OOP) deformations of the heme cofactor are found in numerous heme-
containing proteins and the type of deformation tends to be conserved within functionally …

Investigations of heme distortion, low-frequency vibrational excitations, and electron transfer in cytochrome c

Y Sun, A Benabbas, W Zeng, JG Kleingardner… - Proceedings of the …, 2014 - pnas.org
Cytochrome (cyt) c is an important electron transfer protein. The ruffling deformation of its
heme cofactor has been suggested to relate to its electron transfer rate. However, there is no …

Identification and characterization of protein folding intermediates

S Gianni, Y Ivarsson, P Jemth, M Brunori… - Biophysical …, 2007 - Elsevier
In order to understand the mechanism by which a polypeptide chain folds into its functionally
active native state it is necessary to characterize in detail all the species accumulated along …

[HTML][HTML] What lessons can be learned from studying the folding of homologous proteins?

AA Nickson, J Clarke - Methods, 2010 - Elsevier
The studies of the folding of structurally related proteins have proved to be a very important
tool for investigating protein folding. Here we review some of the insights that have been …

[หนังสือ][B] Protein folding and metal ions: mechanisms, biology and disease

CM Gomes, P Wittung-Stafshede - 2016 - books.google.com
Discussing the role of metal ions in protein folding, this volume provides case examples of
protein folding and stability studies in particular systems as well as proteins that comprise …

Zn2+-Dependent Misfolding of the p53 DNA Binding Domain

JS Butler, SN Loh - Biochemistry, 2007 - ACS Publications
The DNA binding domain (DBD) of p53 folds by a complex mechanism that involves parallel
pathways and multiple intermediates, both on-and off-pathway. This heterogeneity renders …

Protein dynamics and function: Making new strides with an old warhorse, the alkaline conformational transition of cytochrome c

MM Cherney, BE Bowler - Coordination Chemistry Reviews, 2011 - Elsevier
Protein dynamics is intimately linked to function. In metalloproteins, dynamics are often
coupled to redox activity, ligand binding and enzyme function. We provide a concise …

A PDZ domain recapitulates a unifying mechanism for protein folding

S Gianni, CD Geierhaas, N Calosci, P Jemth… - Proceedings of the …, 2007 - pnas.org
A unifying view has been recently proposed according to which the classical diffusion–
collision and nucleation–condensation models may represent two extreme manifestations of …