Collective gradient sensing and chemotaxis: modeling and recent developments

BA Camley - Journal of Physics: Condensed Matter, 2018 - iopscience.iop.org
Cells measure a vast variety of signals, from their environment's stiffness to chemical
concentrations and gradients; physical principles strongly limit how accurately they can do …

Gravireceptors in eukaryotes—A comparison of case studies on the cellular level

DP Häder, M Braun, D Grimm, R Hemmersbach - npj Microgravity, 2017 - nature.com
We have selected five evolutionary very different biological systems ranging from unicellular
protists via algae and higher plants to human cells showing responses to the gravity vector …

[KNYGA][B] Handbook of porous media

K Vafai - 2015 - books.google.com
This third edition offers a comprehensive overview of the latest theories on flow, transport,
and heat-exchange processes in porous media. It also details sophisticated porous media …

Multi-scale modeling of tissues using CompuCell3D

MH Swat, GL Thomas, JM Belmonte, A Shirinifard… - Methods in cell …, 2012 - Elsevier
The study of how cells interact to produce tissue development, homeostasis, or diseases
was, until recently, almost purely experimental. Now, multi-cell computer simulation …

Single-Gene Greenbeard Effects in the Social Amoeba Dictyostelium discoideum

DC Queller, E Ponte, S Bozzaro, JE Strassmann - Science, 2003 - science.org
Selection can favor reproductive altruism if an altruism allele aids copies of itself by hel**
relatives. The alternative “greenbeard” mechanism, in which an allele directly recognizes …

How amoeboids self-organize into a fruiting body: Multicellular coordination in Dictyostelium discoideum

AFM Marée, P Hogeweg - Proceedings of the National Academy of …, 2001 - pnas.org
When individual amoebae of the cellular slime mold Dictyostelium discoideum are starving,
they aggregate to form a multicellular migrating slug, which moves toward a region suitable …

In vivo confinement promotes collective migration of neural crest cells

A Szabó, M Melchionda, G Nastasi, ML Woods… - Journal of Cell …, 2016 - rupress.org
In vitro studies have shown that cells become more prone to collective migration when they
are confined onto micropatterned surfaces (Vedula et al., 2012; Doxzen et al., 2013; Leong …

Evolving mechanisms of morphogenesis: on the interplay between differential adhesion and cell differentiation

P Hogeweg - Journal of theoretical biology, 2000 - Elsevier
Differential cell adhesion, mediated by eg integrin and cadherins/catenines, plays an
important role in morphogenesis and it has been shown that there is intimate cross-talk …

[KNYGA][B] Computing in nonlinear media and automata collectives

A Adamatzky - 2001 - taylorfrancis.com
Computing in Nonlinear Media and Automata Collectives presents an account of new ways
to design massively parallel computing devices in advanced mathematical models, such as …

On cellular automaton approaches to modeling biological cells

MS Alber, MA Kiskowski, JA Glazier, Y Jiang - … systems theory in biology …, 2003 - Springer
We discuss two different types of Cellular Automata (CA): lattice-gas-based cellular
automata (LGCA) and the cellular Potts model (CPM), and describe their applications in …