Biomarker development in the precision medicine era: lung cancer as a case study

AJ Vargas, CC Harris - Nature reviews cancer, 2016 - nature.com
Precision medicine relies on validated biomarkers with which to better classify patients by
their probable disease risk, prognosis and/or response to treatment. Although …

The hallmarks of premalignant conditions: a molecular basis for cancer prevention

BM Ryan, JM Faupel-Badger - Seminars in oncology, 2016 - Elsevier
The hallmarks of premalignant lesions were first described in the 1970s, a time when
relatively little was known about the molecular underpinnings of cancer. Yet it was clear …

Peptides and combination of peptides for use in immunotherapy against small cell lung cancer and other cancers

M Andrea, T Weinschenk, V Goldfinger… - US Patent …, 2019 - Google Patents
The present invention relates to peptides, proteins, nucleic acids and cells for use in
immunotherapeutic methods. In particular, the present invention relates to the immuno …

Peptides and combination of peptides for use in immunotherapy against small cell lung cancer and other cancers

M Andrea, T Weinschenk, V Goldfinger… - US Patent …, 2019 - Google Patents
The present invention relates to peptides, proteins, nucleic acids and cells for use in
immunotherapeutic methods. In particular, the present invention relates to the immuno …

[HTML][HTML] An integrated prognostic classifier for stage I lung adenocarcinoma based on mRNA, microRNA, and DNA methylation biomarkers

AI Robles, E Arai, EA Mathé, H Okayama… - Journal of Thoracic …, 2015 - Elsevier
Introduction: Up to 30% stage I lung cancer patients suffer recurrence within 5 years of
curative surgery. We sought to improve existing protein-coding gene and microRNA …

Denoising autoencoder, a deep learning algorithm, aids the identification of a novel molecular signature of lung adenocarcinoma

J Wang, X **e, J Shi, W He, Q Chen… - Genomics …, 2020 - academic.oup.com
Precise biomarker development is a key step in disease management. However, most of the
published biomarkers were derived from a relatively small number of samples with …

Integration of multiple “OMIC” biomarkers: A precision medicine strategy for lung cancer

AI Robles, CC Harris - Lung Cancer, 2017 - Elsevier
More than half of all new lung cancer diagnoses are made in patients with locally advanced
or metastatic disease, at which point therapeutic options are scarce. It is anticipated …

The prognostic potential of alternative transcript isoforms across human tumors

JL Trincado, E Sebestyen, A Pages, E Eyras - Genome medicine, 2016 - Springer
Background Phenotypic changes during cancer progression are associated with alterations
in gene expression, which can be exploited to build molecular signatures for tumor stage …

[HTML][HTML] Liquid biopsy in early stage lung cancer

C Pérez-Ramírez, M Cañadas-Garre… - … lung cancer research, 2016 - ncbi.nlm.nih.gov
Lung cancer is the leading cause of cancer-associated deaths worldwide. Surgery is the
standard treatment for early-stage non-small cell lung cancer (NSCLC). However, 30% to …

[HTML][HTML] Hallmark guided identification and characterization of a novel immune-relevant signature for prognostication of recurrence in stage I–III lung adenocarcinoma

Y Zhang, Z Yang, Y Tang, C Guo, D Lin, L Cheng… - Genes & …, 2023 - Elsevier
The high risk of postoperative mortality in lung adenocarcinoma (LUAD) patients is
principally driven by cancer recurrence and low response rates to adjuvant treatment. Here …